A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
362.9
nTPM
Monaco:
145.2
nTPM
Schmiedel:
34.8
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
362.9
HPA sample
nTPM
Classical monocyte nTPM: 316.1
Samples: 6
Max nTPM: 454.6
Min nTPM: 228.6
P10809_1003
228.6
P10809_1020
331.3
P10809_1039
454.6
P10809_1058
285.0
P10809_1080
265.0
P10809_1107
332.0
Intermediate monocyte nTPM: 362.9
Samples: 6
Max nTPM: 439.3
Min nTPM: 285.3
P10809_1004
285.3
P10809_1023
439.3
P10809_1042
382.4
P10809_1061
369.3
P10809_1081
291.7
P10809_1108
409.6
Non-classical monocyte nTPM: 361.9
Samples: 5
Max nTPM: 499.8
Min nTPM: 237.1
P10809_1005
237.1
P10809_1053
379.4
P10809_1072
499.8
P10809_1082
295.9
P10809_1109
397.5
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
145.2
Monaco sample
nTPM
Classical monocyte nTPM: 145.2
Samples: 4
Max nTPM: 152.5
Min nTPM: 132.1
RHH5313_R3680
152.5
RHH5221_R3593
132.1
RHH5250_R3622
147.7
RHH5279_R3651
148.3
Intermediate monocyte nTPM: 116.0
Samples: 4
Max nTPM: 128.5
Min nTPM: 99.8
RHH5314_R3681
126.2
RHH5222_R3594
128.5
RHH5251_R3623
99.8
RHH5280_R3652
109.5
Non-classical monocyte nTPM: 134.4
Samples: 4
Max nTPM: 152.3
Min nTPM: 124.4
RHH5315_R3682
124.4
RHH5223_R3595
129.2
RHH5252_R3624
152.3
RHH5281_R3653
131.6
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
34.8
Schmiedel sample id
TPM
Classical monocyte TPM: 32.2
Samples: 91
Max TPM: 38.6
Min TPM: 25.6
MONOCYTES_1
38.6
MONOCYTES_2
37.9
MONOCYTES_3
37.1
MONOCYTES_4
37.0
MONOCYTES_5
36.7
MONOCYTES_6
36.6
MONOCYTES_7
36.5
MONOCYTES_8
36.5
MONOCYTES_9
36.0
MONOCYTES_10
35.9
MONOCYTES_11
35.8
MONOCYTES_12
35.6
MONOCYTES_13
35.6
MONOCYTES_14
35.4
MONOCYTES_15
35.4
MONOCYTES_16
35.1
MONOCYTES_17
35.0
MONOCYTES_18
34.9
MONOCYTES_19
34.8
MONOCYTES_20
34.8
MONOCYTES_21
34.5
MONOCYTES_22
34.3
MONOCYTES_23
34.3
MONOCYTES_24
34.3
MONOCYTES_25
34.2
MONOCYTES_26
34.1
MONOCYTES_27
34.0
MONOCYTES_28
33.5
MONOCYTES_29
33.4
MONOCYTES_30
33.4
MONOCYTES_31
33.3
MONOCYTES_32
33.3
MONOCYTES_33
33.1
MONOCYTES_34
32.9
MONOCYTES_35
32.9
MONOCYTES_36
32.8
MONOCYTES_37
32.6
MONOCYTES_38
32.5
MONOCYTES_39
32.4
MONOCYTES_40
32.3
MONOCYTES_41
32.2
MONOCYTES_42
32.1
MONOCYTES_43
32.1
MONOCYTES_44
32.0
MONOCYTES_45
32.0
MONOCYTES_46
31.8
MONOCYTES_47
31.8
MONOCYTES_48
31.7
MONOCYTES_49
31.6
MONOCYTES_50
31.5
MONOCYTES_51
31.5
MONOCYTES_52
31.4
MONOCYTES_53
31.2
MONOCYTES_54
31.2
MONOCYTES_55
31.2
MONOCYTES_56
31.1
MONOCYTES_57
31.1
MONOCYTES_58
31.0
MONOCYTES_59
31.0
MONOCYTES_60
31.0
MONOCYTES_61
30.9
MONOCYTES_62
30.9
MONOCYTES_63
30.5
MONOCYTES_64
30.4
MONOCYTES_65
30.4
MONOCYTES_66
30.4
MONOCYTES_67
30.4
MONOCYTES_68
30.3
MONOCYTES_69
30.3
MONOCYTES_70
30.3
MONOCYTES_71
30.2
MONOCYTES_72
30.2
MONOCYTES_73
30.2
MONOCYTES_74
30.2
MONOCYTES_75
29.9
MONOCYTES_76
29.9
MONOCYTES_77
29.4
MONOCYTES_78
29.4
MONOCYTES_79
29.2
MONOCYTES_80
29.1
MONOCYTES_81
29.1
MONOCYTES_82
28.7
MONOCYTES_83
28.7
MONOCYTES_84
28.6
MONOCYTES_85
28.5
MONOCYTES_86
28.4
MONOCYTES_87
27.2
MONOCYTES_88
26.9
MONOCYTES_89
26.1
MONOCYTES_90
25.9
MONOCYTES_91
25.6
Show allShow less
Non-classical monocyte TPM: 34.8
Samples: 90
Max TPM: 41.7
Min TPM: 28.3
M2_1
41.7
M2_2
41.2
M2_3
40.5
M2_4
40.2
M2_5
39.8
M2_6
39.6
M2_7
39.4
M2_8
39.4
M2_9
39.0
M2_10
38.7
M2_11
38.5
M2_12
38.5
M2_13
37.9
M2_14
37.8
M2_15
37.6
M2_16
37.6
M2_17
37.5
M2_18
37.3
M2_19
36.9
M2_20
36.9
M2_21
36.8
M2_22
36.8
M2_23
36.8
M2_24
36.8
M2_25
36.5
M2_26
36.4
M2_27
36.1
M2_28
36.1
M2_29
36.0
M2_30
36.0
M2_31
36.0
M2_32
35.9
M2_33
35.9
M2_34
35.8
M2_35
35.8
M2_36
35.7
M2_37
35.7
M2_38
35.6
M2_39
35.5
M2_40
35.5
M2_41
35.3
M2_42
35.1
M2_43
35.1
M2_44
35.0
M2_45
34.9
M2_46
34.7
M2_47
34.7
M2_48
34.6
M2_49
34.6
M2_50
34.5
M2_51
34.4
M2_52
34.3
M2_53
34.2
M2_54
34.2
M2_55
34.2
M2_56
34.1
M2_57
34.1
M2_58
33.9
M2_59
33.9
M2_60
33.7
M2_61
33.5
M2_62
33.4
M2_63
33.4
M2_64
33.3
M2_65
33.2
M2_66
33.0
M2_67
33.0
M2_68
32.8
M2_69
32.8
M2_70
32.7
M2_71
32.5
M2_72
32.4
M2_73
32.2
M2_74
32.1
M2_75
31.6
M2_76
31.5
M2_77
31.5
M2_78
31.0
M2_79
30.9
M2_80
30.7
M2_81
30.5
M2_82
30.4
M2_83
30.4
M2_84
30.3
M2_85
29.6
M2_86
29.6
M2_87
29.3
M2_88
29.3
M2_89
28.8
M2_90
28.3
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
