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RPL17
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  • TISSUE

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  • RPL17
TISSUE PRIMARY DATA HIPPOCAMPAL FORMATION Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hippocampal formation
Tissue methods
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:916.8 nTPM
HPA Brain:227.8 nTPM
GTEx:916.8 nTPM
FANTOM5:26.8 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA043724Antibody HPA046385
Glial cells LowLow
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

227.8
Sample id Sample description nTPM
Hippocampus
nTPM: 223.2
1898 Male, age 80, left hemisphere 268.6
2529 Female, age 94, left hemisphere 241.6
2621 Female, age 67, right hemisphere 228.5
2148 Female, age 91, left hemisphere 216.8
1855 Male, age 76, left hemisphere 192.3
1911 Female, age 85, right hemisphere 191.0
Dentate gyrus
nTPM: 227.8
2530 Female, age 94, left hemisphere 263.1
2010 Male, age 76, both hemispheres 240.9
2246 Female, age 85, both hemispheres 227.1
2531 Female, age 67, both hemispheres 226.1
2528 Male, age 74, both hemispheres 208.4
1927 Female, age 91, both hemispheres 201.0
Entorhinal gyrus
nTPM: 212.4
2686 Male, age 75, right hemisphere 251.5
1787 Male, age 76, left hemisphere 234.6
2117 Female, age 91, right hemisphere 216.4
1938 Female, age 85, left hemisphere 201.0
2764 Male, age 80, right hemisphere 201.0
2613 Female, age 94, left hemisphere 170.3
Hippocampus, CA1
nTPM: 215.9
2045 Male, age 76, both hemispheres 232.9
2082 Female, age 91, right hemisphere 224.7
1873 Female, age 85, both hemispheres 214.2
2527 Male, age 74, both hemispheres 209.7
2749 Male, age 80, left hemisphere 198.3
Hippocampus, CA2
nTPM: 214.2
1963 Male, age 80, left hemisphere 238.9
1892 Male, age 76, both hemispheres 223.2
2437 Female, age 94, left hemisphere 217.3
2249 Male, age 74, both hemispheres 206.4
1940 Female, age 85, left hemisphere 202.3
2113 Female, age 91, right hemisphere 197.0
Hippocampus, CA3
nTPM: 208.1
1867 Male, age 76, both hemispheres 236.2
2436 Male, age 74, both hemispheres 213.8
1891 Female, age 85, both hemispheres 211.3
2861 Female, age 67, both hemispheres 204.1
2137 Male, age 80, left hemisphere 192.5
2620 Female, age 94, left hemisphere 190.4
Parahippocampal cortex
nTPM: 199.4
2018 Male, age 76, both hemispheres 249.9
1850 Male, age 80, both hemispheres 235.1
1990 Female, age 91, right hemisphere 207.7
2532 Female, age 72, left hemisphere 199.1
2250 Female, age 67, right hemisphere 198.7
2692 Male, age 74, both hemispheres 191.0
1933 Female, age 85, both hemispheres 188.5
2245 Female, age 91, both hemispheres 186.6
2622 Female, age 67, right hemisphere 169.6
2693 Female, age 94, both hemispheres 167.5
Perirhinal gyrus
nTPM: 223.0
1794 Male, age 80, right hemisphere 237.4
1841 Female, age 85, right hemisphere 234.1
2848 Male, age 76, right hemisphere 224.4
1847 Female, age 91, left hemisphere 212.9
2521 Female, age 94, right hemisphere 206.3
Subiculum
nTPM: 212.7
2438 Female, age 94, left hemisphere 233.4
1977 Female, age 85, both hemispheres 228.6
2042 Male, age 76, both hemispheres 222.3
2729 Female, age 91, right hemisphere 208.4
1901 Male, age 80, both hemispheres 193.4
2619 Male, age 74, both hemispheres 190.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

916.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 916.8
Samples: 255

Max nTPM: 2986.4
Min nTPM: 467.9
Std nTPM: 296.8
Median nTPM: 854.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2986.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2107.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2038.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1915.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1695.0
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1658.9
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1647.5
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1625.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1568.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1475.2
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 1458.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1442.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1428.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1419.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1416.8
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1413.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1408.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1407.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1379.2
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 1361.8
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 1346.7
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 1331.6
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 1308.5
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 1291.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 1268.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 1266.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 1261.3
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 1253.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 1217.6
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 1212.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 1195.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 1188.5
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 1187.0
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 1181.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1179.0
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 1174.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1169.3
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 1165.9
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 1163.2
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 1161.3
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 1141.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 1141.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1140.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 1136.9
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 1125.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 1123.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 1119.3
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 1108.1
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 1101.6
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 1100.4
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 1098.9
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 1095.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 1092.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1087.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1086.0
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 1074.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1073.7
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 1066.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 1062.4
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 1062.1
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 1060.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1053.6
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 1031.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1030.5
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 1027.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1020.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 1020.1
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 1007.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 1005.9
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 1005.8
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 1005.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 980.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 971.6
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 969.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 968.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 966.0
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 964.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 963.7
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 961.5
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 959.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 957.9
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 956.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 953.2
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 951.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 946.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 946.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 943.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 942.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 940.8
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 939.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 937.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 936.4
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 930.7
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 930.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 929.7
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 929.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 928.7
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 925.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 920.5
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 919.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 917.0
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 916.8
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 911.3
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 911.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 906.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 902.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 899.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 898.5
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 897.0
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 895.9
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 889.1
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 887.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 886.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 883.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 882.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 876.8
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 873.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 869.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 869.5
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 869.3
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 865.9
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 863.6
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 863.1
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 861.3
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 856.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 855.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 855.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 854.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 853.1
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 852.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 851.1
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 850.0
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 849.1
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 849.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 848.5
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 845.7
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 841.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 841.5
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 837.3
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 834.5
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 834.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 829.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 828.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 824.5
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 824.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 822.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 818.0
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 810.9
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 808.2
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 806.1
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 804.8
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 799.6
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 798.8
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 794.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 794.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 793.3
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 792.1
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 792.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 789.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 788.0
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 785.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 782.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 781.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 779.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 776.5
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 772.6
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 771.6
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 771.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 770.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 769.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 767.9
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 767.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 767.0
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 764.9
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 759.7
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 759.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 757.2
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 755.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 754.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 753.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 750.6
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 746.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 745.9
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 740.5
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 739.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 737.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 737.2
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 735.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 734.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 730.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 730.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 727.6
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 726.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 723.9
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 723.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 723.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 722.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 721.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 719.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 718.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 716.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 715.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 710.3
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 707.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 703.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 703.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 702.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 702.4
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 699.3
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 696.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 693.2
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 688.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 687.3
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 684.6
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 683.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 680.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 675.5
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 670.4
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 665.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 664.8
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 664.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 658.1
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 657.9
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 650.8
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 649.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 648.6
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 648.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 645.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 643.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 636.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 628.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 628.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 615.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 614.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 611.6
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 608.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 606.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 603.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 597.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 589.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 588.8
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 586.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 585.4
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 575.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 574.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 572.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 563.6
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 548.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 540.8
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 523.5
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 518.4
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 506.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 493.8
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 484.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 467.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.8
FF:10169-103B7 60 years, female 27.0
FF:10153-102I9 76 years, female 26.6

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