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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1906.2 nTPM
HPA:1906.2 nTPM
GTEx:1780.4 nTPM
FANTOM5:99.9 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA043724Antibody HPA046385
Glandular cells HighMedium





SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1906.2
overview
Female, age 68
Salivary gland sample 216
nTPM: 1851.1
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1816.7
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 2050.8
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1780.4
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1780.4
Samples: 181

Max nTPM: 3106.0
Min nTPM: 1083.3
Std nTPM: 336.3
Median nTPM: 1745.4
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 3106.0
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 3001.0
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 2806.4
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 2693.5
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 2626.8
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 2473.4
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 2415.2
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 2393.3
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 2354.6
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 2339.3
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 2306.6
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 2302.3
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 2260.1
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 2239.6
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 2229.3
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 2222.1
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 2219.2
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 2218.0
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 2200.7
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 2187.0
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 2177.2
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 2173.9
GTEX-146FR-1226-SM-5MR78 60-69 years, female 2171.8
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 2165.3
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 2140.0
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 2137.9
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 2118.4
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 2115.1
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 2110.5
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 2103.5
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 2101.1
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 2081.9
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 2080.9
GTEX-11P82-0926-SM-5986X 20-29 years, male 2070.3
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 2066.3
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 2060.4
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 2037.8
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 2033.5
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 2024.3
GTEX-1445S-2926-SM-5O993 60-69 years, male 2020.4
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 2002.9
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1995.6
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 1992.0
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 1990.5
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 1978.1
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1972.5
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1961.7
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1959.4
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1955.4
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1947.5
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 1936.3
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1927.1
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1919.5
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1908.4
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1905.9
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 1903.8
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1894.8
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1877.4
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 1870.1
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1869.8
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 1861.9
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1852.4
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1851.5
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 1845.3
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1844.2
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1843.5
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1843.5
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1840.8
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 1828.9
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 1825.7
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1824.1
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1817.0
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1815.5
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1813.6
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1797.2
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1786.3
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1783.1
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1782.2
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1779.3
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1778.0
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1770.2
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1765.5
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1764.7
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 1762.8
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1758.5
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 1757.7
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1756.2
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1754.9
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1752.0
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 1749.1
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1745.4
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1736.9
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1726.7
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1721.0
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 1716.8
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1715.9
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1708.5
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1706.3
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 1704.9
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1698.8
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1696.2
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1689.5
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1688.1
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1675.9
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1675.8
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1671.7
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1670.3
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1654.0
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1646.5
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1645.7
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 1645.3
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1643.8
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1642.2
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1637.8
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 1634.4
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 1633.1
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1630.9
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1626.2
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1625.4
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1622.8
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1620.1
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1617.7
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1617.3
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1609.0
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1607.8
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1606.0
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1596.2
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1584.7
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1571.9
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1562.1
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1558.5
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1558.1
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1557.7
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1554.4
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1551.5
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1549.5
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1549.0
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1548.9
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 1547.0
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 1545.1
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1544.3
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1541.2
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1534.4
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1532.6
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1515.9
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1511.8
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1508.1
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 1495.2
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1494.2
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1493.6
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 1483.7
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 1478.9
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1473.5
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1470.7
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1469.2
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1458.6
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1458.2
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 1448.0
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 1427.7
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 1420.3
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1399.4
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1393.8
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1392.7
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1391.4
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1390.3
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1390.3
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 1384.6
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1370.5
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 1358.1
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1352.1
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1345.6
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 1342.6
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 1306.3
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1304.8
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1295.7
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1266.7
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1235.4
GTEX-1B932-0626-SM-731EM 40-49 years, female 1134.0
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 1131.9
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1120.6
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 1083.3
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

99.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 99.9
FF:10199-103F1 23 years, male 99.9
Salivary gland
Scaled Tags Per Million: 65.7
FF:10093-102C3 16-60 years, mixed 65.7
Submaxillary gland
Scaled Tags Per Million: 52.6
FF:10202-103F4 24 years, male 52.6

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