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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.4
nTPM
HPA Brain:
96.4
nTPM
GTEx:
49.4
nTPM
FANTOM5:
58.8
Scaled Tags Per Million
Pig:
70.6
nTPM
Mouse:
32.3
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
96.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 82.4
2586
Male, age 75, left hemisphere
106.0
1830
Male, age 51, unknown
93.2
2019
Male, age 18, unknown
87.0
2219
Male, age 76, both hemispheres
86.5
2411
Female, age 72, unknown
83.0
1833
Male, age 53, unknown
82.1
2666
Male, age 74, left hemisphere
78.1
2828
Female, age 72, unknown
74.5
1870
Female, age 42, unknown
71.7
1827
Male, age 72, unknown
61.5
Dorsal raphe nucleus nTPM: 58.7
2750
Male, age 76, both hemispheres
94.4
2016
Female, age 72, unknown
62.8
1828
Male, age 53, unknown
52.5
2047
Male, age 72, unknown
46.8
2298
Female, age 72, unknown
37.1
Inferior colliculus nTPM: 50.3
2849
Male, age 72, unknown
63.8
1890
Male, age 53, unknown
53.9
1848
Female, age 42, unknown
51.3
2097
Female, age 72, unknown
32.2
Median raphe nucleus nTPM: 64.3
2220
Male, age 76, midline
64.3
Periaquaductal grey, anterior nTPM: 64.4
1947
Male, age 18, unknown
78.9
2502
Female, age 75, unknown
60.6
1795
Male, age 51, unknown
53.6
Periaquaductal grey, dorsal nTPM: 41.8
2464
Female, age 72, unknown
57.6
1831
Male, age 72, unknown
45.3
1840
Male, age 53, unknown
32.7
2850
Male, age 76, both hemispheres
31.6
Periaquaductal grey, lateral nTPM: 53.8
2272
Male, age 74, both hemispheres
67.4
2053
Male, age 18, unknown
55.1
2140
Male, age 76, both hemispheres
39.0
Pretectal area nTPM: 55.3
2316
Male, age 76, right hemisphere
90.5
2407
Male, age 75, both hemispheres
86.4
1815
Male, age 53, unknown
64.5
2007
Male, age 72, unknown
58.9
2825
Male, age 18, unknown
55.4
1817
Female, age 42, unknown
46.0
2224
Female, age 72, unknown
45.8
2273
Male, age 74, both hemispheres
45.3
1944
Female, age 72, unknown
43.6
1816
Male, age 51, unknown
38.8
2667
Female, age 75, unknown
33.5
Red nucleus nTPM: 96.4
2823
Male, age 76, right hemisphere
119.3
2584
Male, age 75, left hemisphere
115.5
2769
Male, age 72, unknown
113.6
2588
Male, age 74, left hemisphere
112.4
2227
Male, age 72, unknown
110.2
1904
Male, age 53, unknown
101.0
1865
Male, age 51, unknown
98.5
2503
Female, age 72, unknown
90.1
2785
Male, age 18, unknown
84.5
2725
Female, age 75, unknown
80.5
1954
Female, age 42, unknown
69.1
1821
Female, age 72, unknown
61.9
Substantia nigra nTPM: 61.5
2583
Male, age 75, right hemisphere
101.0
2590
Female, age 75, unknown
83.2
1851
Male, age 51, unknown
67.1
1941
Male, age 53, unknown
64.3
2699
Male, age 18, unknown
57.0
2409
Female, age 72, unknown
55.3
1916
Female, age 42, unknown
52.8
2665
Male, age 74, both hemispheres
51.2
1889
Female, age 72, unknown
50.7
2241
Male, age 72, unknown
32.0
Superior colliculus nTPM: 72.1
1913
Female, age 42, unknown
98.8
2668
Female, age 75, unknown
95.7
1995
Male, age 72, unknown
88.9
1839
Male, age 51, unknown
77.6
2587
Male, age 74, left hemisphere
71.9
1895
Male, age 76, right hemisphere
68.0
1796
Male, age 53, unknown
61.9
2664
Male, age 75, both hemispheres
60.9
2261
Male, age 18, unknown
55.5
2087
Female, age 72, unknown
41.8
Ventral tegmental area nTPM: 67.9
2223
Female, age 72, unknown
78.0
2410
Female, age 72, unknown
73.5
1942
Male, age 51, unknown
72.1
2218
Male, age 76, both hemispheres
64.8
2021
Male, age 53, unknown
63.6
1915
Female, age 42, unknown
55.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
49.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 49.4
Samples: 139
Max nTPM: 205.6
Min nTPM: 9.1
Std nTPM: 28.1
Median nTPM: 43.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
205.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
176.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
170.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
115.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
104.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
97.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
97.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
91.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
89.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
83.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
82.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
79.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
79.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
78.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
77.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
76.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
72.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
72.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
70.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
69.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
67.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
67.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
67.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
66.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
66.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
64.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
64.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
63.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
62.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
62.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
60.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
59.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
59.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
58.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
58.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
57.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
57.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
57.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
54.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
54.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
54.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
54.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
54.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
53.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
53.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
53.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
53.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
52.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
52.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
51.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
51.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
50.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
49.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
48.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
46.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
46.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
46.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
46.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
46.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
46.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
46.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
46.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
45.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
45.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
44.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
44.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
43.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
43.5
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
43.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
43.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
43.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
41.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
41.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
41.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
41.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
41.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
41.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
41.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
41.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
41.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
41.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
40.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
40.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
40.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
39.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
39.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
39.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
39.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
39.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
38.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
38.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
38.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
38.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
38.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
37.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
37.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
37.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
37.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
36.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
36.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
36.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
35.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
35.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
34.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
34.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
34.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
33.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
33.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
32.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
32.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
32.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
32.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
31.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
31.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
30.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
30.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
29.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
29.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
28.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
25.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
25.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
25.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
25.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
23.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
22.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
22.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
22.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
21.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
21.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
17.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
17.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
17.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
16.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
16.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
16.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
13.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
12.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
9.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
9.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.