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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
48.4
nTPM
HPA Brain:
70.7
nTPM
GTEx:
48.4
nTPM
FANTOM5:
77.6
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
70.7
Sample id
Sample description
nTPM
Amygdala nTPM: 54.8
2814
Male, age 76, right hemisphere
69.2
2517
Female, age 94, left hemisphere
56.6
2695
Female, age 67, right hemisphere
55.6
1987
Female, age 91, left hemisphere
47.2
2514
Male, age 75, right hemisphere
45.3
Basal amygdala nTPM: 68.0
2827
Female, age 67, right hemisphere
84.5
2685
Female, age 94, left hemisphere
78.3
1955
Male, age 76, both hemispheres
72.1
2110
Male, age 80, left hemisphere
67.8
2243
Female, age 91, right hemisphere
66.0
2609
Male, age 75, right hemisphere
39.5
Central amygdala nTPM: 58.5
2239
Male, age 80, left hemisphere
73.1
1905
Male, age 76, both hemispheres
70.6
2826
Female, age 94, left hemisphere
62.0
2701
Female, age 91, right hemisphere
45.6
2515
Male, age 75, right hemisphere
41.1
Corticomedial amygdala nTPM: 65.9
2535
Female, age 67, right hemisphere
84.2
2829
Male, age 80, left hemisphere
73.0
2242
Female, age 91, right hemisphere
72.4
2240
Male, age 76, both hemispheres
67.0
2429
Female, age 94, left hemisphere
61.2
2428
Male, age 75, right hemisphere
37.8
Lateral amygdala nTPM: 70.7
2830
Female, age 67, right hemisphere
85.8
2534
Female, age 94, left hemisphere
83.0
2256
Male, age 80, left hemisphere
78.4
1883
Male, age 76, both hemispheres
64.8
2255
Female, age 91, right hemisphere
58.5
2516
Male, age 75, right hemisphere
54.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 48.4
Samples: 181
Max nTPM: 140.0
Min nTPM: 6.6
Std nTPM: 24.1
Median nTPM: 46.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
140.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
132.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
129.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
117.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
116.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
115.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
107.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
100.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
89.1
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
88.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
86.1
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
85.3
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
84.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
83.7
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
82.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
80.6
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
80.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
78.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
77.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
77.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
75.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
74.5
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
73.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
72.7
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
72.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
71.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
71.9
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
70.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
70.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
70.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
68.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
68.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
68.0
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
66.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
65.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
64.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
64.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
63.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
62.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
62.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
62.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
61.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
60.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
60.7
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
60.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
59.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
58.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
57.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
57.5
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
57.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
56.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
56.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
56.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
55.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
54.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
54.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
54.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
54.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
54.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
53.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
53.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
53.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
52.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
52.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
52.0
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
51.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
51.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
51.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
51.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
50.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
50.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
50.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
50.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
50.3
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
50.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
49.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
49.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
49.4
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
49.1
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
49.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
48.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
48.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
48.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
48.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
47.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
47.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
46.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
46.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
46.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
46.1
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
45.6
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
45.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
45.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
45.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
45.0
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
44.7
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
44.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
43.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
43.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
43.0
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
42.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
42.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
41.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
41.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
40.7
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
40.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
39.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
39.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
38.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
38.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
38.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
38.2
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
37.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
37.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
37.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
36.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
36.5
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
36.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
36.1
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
35.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
35.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
35.3
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
35.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
35.1
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
34.6
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
34.1
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
33.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
33.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
33.5
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
33.5
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
33.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
33.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
32.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
32.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
32.9
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
32.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
32.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
31.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
31.2
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
30.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
30.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.7
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
29.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
29.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
29.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
28.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
28.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
28.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
27.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
27.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
26.7
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
26.6
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
26.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
26.6
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
26.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
25.9
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
25.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
25.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
25.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
25.4
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
23.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
22.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
22.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
20.3
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
19.5
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
18.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
18.3
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
17.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
16.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
16.4
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
15.8
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
15.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
12.7
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
11.9
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
11.6
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
10.3
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
9.2
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
8.9
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
7.8
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
6.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.