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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
100.2
nTPM
HPA Brain:
264.4
nTPM
GTEx:
100.2
nTPM
FANTOM5:
519.1
Scaled Tags Per Million
Pig:
4.8
nTPM
Mouse:
10.5
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
264.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 179.8
2019
Male, age 18, unknown
253.1
1870
Female, age 42, unknown
227.5
1830
Male, age 51, unknown
227.2
1833
Male, age 53, unknown
205.7
2411
Female, age 72, unknown
198.5
2828
Female, age 72, unknown
160.0
2586
Male, age 75, left hemisphere
136.4
2666
Male, age 74, left hemisphere
134.7
1827
Male, age 72, unknown
128.7
2219
Male, age 76, both hemispheres
125.9
Dorsal raphe nucleus nTPM: 151.5
2750
Male, age 76, both hemispheres
252.6
2016
Female, age 72, unknown
142.9
1828
Male, age 53, unknown
136.5
2298
Female, age 72, unknown
118.2
2047
Male, age 72, unknown
107.1
Inferior colliculus nTPM: 114.3
1848
Female, age 42, unknown
118.8
2849
Male, age 72, unknown
117.8
1890
Male, age 53, unknown
115.2
2097
Female, age 72, unknown
105.4
Median raphe nucleus nTPM: 128.3
2220
Male, age 76, midline
128.3
Periaquaductal grey, anterior nTPM: 104.3
2502
Female, age 75, unknown
110.7
1947
Male, age 18, unknown
104.6
1795
Male, age 51, unknown
97.7
Periaquaductal grey, dorsal nTPM: 99.8
2464
Female, age 72, unknown
139.5
1831
Male, age 72, unknown
100.9
2850
Male, age 76, both hemispheres
90.9
1840
Male, age 53, unknown
68.0
Periaquaductal grey, lateral nTPM: 118.3
2272
Male, age 74, both hemispheres
134.5
2053
Male, age 18, unknown
123.9
2140
Male, age 76, both hemispheres
96.7
Pretectal area nTPM: 127.3
1815
Male, age 53, unknown
174.4
2667
Female, age 75, unknown
171.9
2316
Male, age 76, right hemisphere
140.1
2273
Male, age 74, both hemispheres
138.8
2407
Male, age 75, both hemispheres
134.9
2007
Male, age 72, unknown
123.2
1817
Female, age 42, unknown
122.3
2825
Male, age 18, unknown
115.2
1944
Female, age 72, unknown
105.4
2224
Female, age 72, unknown
103.2
1816
Male, age 51, unknown
70.5
Red nucleus nTPM: 264.4
2823
Male, age 76, right hemisphere
362.7
1904
Male, age 53, unknown
322.8
1865
Male, age 51, unknown
308.8
2227
Male, age 72, unknown
293.3
2769
Male, age 72, unknown
287.4
2785
Male, age 18, unknown
271.2
1821
Female, age 72, unknown
270.8
1954
Female, age 42, unknown
251.7
2588
Male, age 74, left hemisphere
241.2
2503
Female, age 72, unknown
221.1
2584
Male, age 75, left hemisphere
186.1
2725
Female, age 75, unknown
155.5
Substantia nigra nTPM: 146.3
2583
Male, age 75, right hemisphere
209.2
2409
Female, age 72, unknown
181.1
1851
Male, age 51, unknown
174.3
2699
Male, age 18, unknown
162.9
2590
Female, age 75, unknown
159.9
1889
Female, age 72, unknown
138.6
2241
Male, age 72, unknown
120.0
1941
Male, age 53, unknown
119.7
1916
Female, age 42, unknown
107.7
2665
Male, age 74, both hemispheres
89.7
Superior colliculus nTPM: 137.8
1913
Female, age 42, unknown
226.1
1995
Male, age 72, unknown
207.3
2587
Male, age 74, left hemisphere
150.1
1839
Male, age 51, unknown
139.7
1895
Male, age 76, right hemisphere
134.5
2668
Female, age 75, unknown
130.7
1796
Male, age 53, unknown
120.5
2087
Female, age 72, unknown
108.0
2664
Male, age 75, both hemispheres
86.1
2261
Male, age 18, unknown
75.4
Ventral tegmental area nTPM: 165.8
2223
Female, age 72, unknown
262.7
2410
Female, age 72, unknown
181.1
2021
Male, age 53, unknown
147.0
1942
Male, age 51, unknown
145.9
2218
Male, age 76, both hemispheres
133.2
1915
Female, age 42, unknown
125.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
100.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 100.2
Samples: 139
Max nTPM: 325.5
Min nTPM: 25.5
Std nTPM: 52.2
Median nTPM: 89.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
325.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
318.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
292.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
271.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
235.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
227.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
189.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
175.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
172.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
170.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
169.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
168.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
165.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
163.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
156.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
154.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
150.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
150.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
147.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
144.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
142.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
142.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
140.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
140.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
140.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
139.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
136.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
129.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
126.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
124.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
122.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
122.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
121.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
119.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
119.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
118.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
117.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
115.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
114.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
113.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
112.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
112.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
109.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
108.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
108.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
108.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
106.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
106.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
104.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
104.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
103.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
101.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
97.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
96.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
96.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
95.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
95.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
95.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
94.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
93.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
92.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
92.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
92.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
91.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
91.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
91.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
90.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
90.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
90.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
89.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
89.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
87.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
87.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
86.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
86.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
85.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
84.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
84.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
84.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
83.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
82.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
82.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
81.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
81.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
80.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
80.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
75.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
75.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
74.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
74.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
74.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
73.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
73.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
73.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
72.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
71.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
71.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
70.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
70.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
69.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
69.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
69.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
69.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
68.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
67.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
66.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
65.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
65.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
65.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
65.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
65.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
64.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
63.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
62.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
61.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
61.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
60.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
60.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
60.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
59.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
59.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
58.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
58.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
57.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
56.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
55.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
50.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
48.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
45.6
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
42.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
41.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
39.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
35.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
33.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
29.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
27.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
26.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
25.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
25.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
10.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 10.5
Samples: 4
Max nTPM: 12.2
Min nTPM: 9.8
Sample A
Male
12.2
Sample B
Male
9.8
Sample C
Female
10.3
Sample D
Female
9.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.