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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2381.8
nTPM
Monaco:
1132.3
nTPM
Schmiedel:
1003.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2381.8
HPA sample
nTPM
gdT-cell nTPM: 1069.4
Samples: 6
Max nTPM: 1447.4
Min nTPM: 768.3
P10809_1007
1447.4
P10809_1022
1103.5
P10809_1041
1223.0
P10809_1060
768.3
P10809_1077
818.8
P10809_1098
1055.3
MAIT T-cell nTPM: 1893.2
Samples: 6
Max nTPM: 2211.6
Min nTPM: 1530.4
P10809_1006
2080.5
P10809_1024
1874.2
P10809_1043
1842.4
P10809_1062
1819.9
P10809_1083
1530.4
P10809_1097
2211.6
Memory CD4 T-cell nTPM: 1927.4
Samples: 6
Max nTPM: 2467.7
Min nTPM: 1234.7
P10809_1014
2467.7
P10809_1026
2371.2
P10809_1045
2105.4
P10809_1064
1423.7
P10809_1086
1234.7
P10809_1113
1961.7
Memory CD8 T-cell nTPM: 1461.4
Samples: 5
Max nTPM: 1836.9
Min nTPM: 1157.4
P10809_1012
1836.9
P10809_1027
1352.4
P10809_1046
1626.8
P10809_1065
1157.4
P10809_1111
1333.3
Naive CD4 T-cell nTPM: 2381.8
Samples: 6
Max nTPM: 3029.0
Min nTPM: 1564.8
P10809_1015
3029.0
P10809_1030
2519.1
P10809_1049
2481.3
P10809_1068
2352.2
P10809_1085
1564.8
P10809_1112
2344.4
Naive CD8 T-cell nTPM: 1987.9
Samples: 6
Max nTPM: 3692.1
Min nTPM: 812.1
P10809_1016
3692.1
P10809_1031
1956.9
P10809_1050
1787.2
P10809_1069
1623.0
P10809_1087
812.1
P10809_1110
2056.0
T-reg nTPM: 1712.5
Samples: 6
Max nTPM: 1896.0
Min nTPM: 1436.7
P10809_1018
1738.8
P10809_1037
1436.7
P10809_1056
1896.0
P10809_1075
1791.7
P10809_1094
1733.3
P10809_1106
1678.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1132.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 720.1
Samples: 4
Max nTPM: 828.7
Min nTPM: 420.1
RHH5202_R3573
420.1
RHH5230_R3602
813.6
RHH5259_R3631
828.7
RHH5288_R3660
817.9
Effector memory CD8 T-cell nTPM: 301.8
Samples: 4
Max nTPM: 441.9
Min nTPM: 195.4
RHH5203_R3574
295.3
RHH5231_R3603
274.7
RHH5260_R3632
441.9
RHH5289_R3661
195.4
MAIT T-cell nTPM: 659.4
Samples: 4
Max nTPM: 910.7
Min nTPM: 469.7
RHH5233_R3605
469.7
RHH5205_R3576
650.8
RHH5262_R3634
606.5
RHH5297_R3663
910.7
Memory CD4 T-cell TFH nTPM: 708.7
Samples: 4
Max nTPM: 916.1
Min nTPM: 522.0
RHH5300_R3666
834.4
RHH5236_R3608
916.1
RHH5265_R3637
562.2
RHH5208_R3579
522.0
Memory CD4 T-cell Th1 nTPM: 975.9
Samples: 4
Max nTPM: 1328.5
Min nTPM: 504.4
RHH5210_R3581
504.4
RHH5302_R3668
1328.5
RHH5238_R3610
1236.5
RHH5267_R3639
834.2
Memory CD4 T-cell Th1/Th17 nTPM: 845.3
Samples: 4
Max nTPM: 934.6
Min nTPM: 630.4
RHH5303_R3669
921.1
RHH5211_R3582
630.4
RHH5239_R3611
895.1
RHH5268_R3640
934.6
Memory CD4 T-cell Th17 nTPM: 768.6
Samples: 4
Max nTPM: 1045.9
Min nTPM: 660.4
RHH5304_R3670
1045.9
RHH5212_R3583
685.5
RHH5240_R3612
682.4
RHH5269_R3641
660.4
Memory CD4 T-cell Th2 nTPM: 866.9
Samples: 4
Max nTPM: 1263.7
Min nTPM: 644.9
RHH5305_R3671
1263.7
RHH5213_R3584
727.1
RHH5241_R3613
832.0
RHH5270_R3642
644.9
Naive CD4 T-cell nTPM: 1132.3
Samples: 4
Max nTPM: 1504.1
Min nTPM: 778.7
RHH5306_R3672
1504.1
RHH5214_R3585
1371.5
RHH5242_R3614
778.7
RHH5271_R3643
874.8
Naive CD8 T-cell nTPM: 930.7
Samples: 4
Max nTPM: 1164.0
Min nTPM: 613.9
RHH5201_R3572
613.9
RHH5229_R3601
1087.8
RHH5258_R3630
857.2
RHH5287_R3659
1164.0
Non-Vd2 gdTCR nTPM: 421.0
Samples: 4
Max nTPM: 571.8
Min nTPM: 320.7
RHH5235_R3607
468.7
RHH5264_R3636
320.7
RHH5207_R3578
322.9
RHH5299_R3665
571.8
T-reg nTPM: 813.8
Samples: 4
Max nTPM: 1188.3
Min nTPM: 560.6
RHH5301_R3667
1188.3
RHH5237_R3609
560.6
RHH5266_R3638
753.4
RHH5209_R3580
752.8
Terminal effector memory CD4 T-cell nTPM: 404.2
Samples: 2
Max nTPM: 426.9
Min nTPM: 381.4
RHH5243_R3615
426.9
RHH5272_R3644
381.4
Terminal effector memory CD8 T-cell nTPM: 512.2
Samples: 4
Max nTPM: 942.2
Min nTPM: 219.8
RHH5232_R3604
219.8
RHH5204_R3575
942.2
RHH5261_R3633
432.3
RHH5296_R3662
454.3
Vd2 gdTCR nTPM: 833.2
Samples: 4
Max nTPM: 1113.9
Min nTPM: 545.7
RHH5234_R3606
545.7
RHH5206_R3577
1104.7
RHH5263_R3635
568.4
RHH5298_R3664
1113.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.