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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
101.7
nTPM
Monaco:
222.0
nTPM
Schmiedel:
160.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
101.7
HPA sample
nTPM
gdT-cell nTPM: 83.5
Samples: 6
Max nTPM: 98.3
Min nTPM: 63.4
P10809_1007
63.4
P10809_1022
98.3
P10809_1041
80.0
P10809_1060
84.1
P10809_1077
86.0
P10809_1098
88.9
MAIT T-cell nTPM: 101.7
Samples: 6
Max nTPM: 136.7
Min nTPM: 82.6
P10809_1006
82.6
P10809_1024
136.7
P10809_1043
84.6
P10809_1062
100.3
P10809_1083
100.2
P10809_1097
105.6
Memory CD4 T-cell nTPM: 76.1
Samples: 6
Max nTPM: 93.2
Min nTPM: 69.9
P10809_1014
72.0
P10809_1026
70.7
P10809_1045
79.1
P10809_1064
71.8
P10809_1086
93.2
P10809_1113
69.9
Memory CD8 T-cell nTPM: 84.9
Samples: 5
Max nTPM: 93.7
Min nTPM: 70.9
P10809_1012
70.9
P10809_1027
85.7
P10809_1046
85.3
P10809_1065
93.7
P10809_1111
89.1
Naive CD4 T-cell nTPM: 65.8
Samples: 6
Max nTPM: 74.5
Min nTPM: 56.0
P10809_1015
56.0
P10809_1030
73.3
P10809_1049
58.6
P10809_1068
74.5
P10809_1085
70.1
P10809_1112
62.3
Naive CD8 T-cell nTPM: 72.8
Samples: 6
Max nTPM: 93.0
Min nTPM: 61.1
P10809_1016
61.1
P10809_1031
93.0
P10809_1050
63.2
P10809_1069
78.1
P10809_1087
74.4
P10809_1110
67.1
T-reg nTPM: 101.6
Samples: 6
Max nTPM: 129.2
Min nTPM: 84.1
P10809_1018
84.1
P10809_1037
129.2
P10809_1056
98.2
P10809_1075
117.5
P10809_1094
88.4
P10809_1106
91.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
222.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 158.4
Samples: 4
Max nTPM: 189.2
Min nTPM: 130.4
RHH5202_R3573
189.2
RHH5230_R3602
143.2
RHH5259_R3631
130.4
RHH5288_R3660
170.8
Effector memory CD8 T-cell nTPM: 222.0
Samples: 4
Max nTPM: 273.3
Min nTPM: 174.6
RHH5203_R3574
273.3
RHH5231_R3603
227.3
RHH5260_R3632
174.6
RHH5289_R3661
212.7
MAIT T-cell nTPM: 207.7
Samples: 4
Max nTPM: 255.9
Min nTPM: 158.1
RHH5233_R3605
209.5
RHH5205_R3576
255.9
RHH5262_R3634
207.2
RHH5297_R3663
158.1
Memory CD4 T-cell TFH nTPM: 158.7
Samples: 4
Max nTPM: 180.2
Min nTPM: 139.4
RHH5300_R3666
139.4
RHH5236_R3608
174.5
RHH5265_R3637
140.7
RHH5208_R3579
180.2
Memory CD4 T-cell Th1 nTPM: 148.7
Samples: 4
Max nTPM: 173.9
Min nTPM: 139.4
RHH5210_R3581
139.4
RHH5302_R3668
141.4
RHH5238_R3610
140.2
RHH5267_R3639
173.9
Memory CD4 T-cell Th1/Th17 nTPM: 180.7
Samples: 4
Max nTPM: 199.1
Min nTPM: 157.8
RHH5303_R3669
185.4
RHH5211_R3582
199.1
RHH5239_R3611
157.8
RHH5268_R3640
180.5
Memory CD4 T-cell Th17 nTPM: 170.6
Samples: 4
Max nTPM: 194.3
Min nTPM: 152.6
RHH5304_R3670
172.3
RHH5212_R3583
152.6
RHH5240_R3612
194.3
RHH5269_R3641
163.3
Memory CD4 T-cell Th2 nTPM: 153.4
Samples: 4
Max nTPM: 180.3
Min nTPM: 128.2
RHH5305_R3671
140.3
RHH5213_R3584
180.3
RHH5241_R3613
128.2
RHH5270_R3642
164.6
Naive CD4 T-cell nTPM: 118.1
Samples: 4
Max nTPM: 159.9
Min nTPM: 100.3
RHH5306_R3672
102.4
RHH5214_R3585
109.6
RHH5242_R3614
100.3
RHH5271_R3643
159.9
Naive CD8 T-cell nTPM: 131.8
Samples: 4
Max nTPM: 162.8
Min nTPM: 81.4
RHH5201_R3572
162.8
RHH5229_R3601
81.4
RHH5258_R3630
152.4
RHH5287_R3659
130.7
Non-Vd2 gdTCR nTPM: 217.5
Samples: 4
Max nTPM: 268.6
Min nTPM: 156.9
RHH5235_R3607
268.6
RHH5264_R3636
204.9
RHH5207_R3578
239.4
RHH5299_R3665
156.9
T-reg nTPM: 153.1
Samples: 4
Max nTPM: 186.0
Min nTPM: 128.3
RHH5301_R3667
128.3
RHH5237_R3609
153.2
RHH5266_R3638
144.8
RHH5209_R3580
186.0
Terminal effector memory CD4 T-cell nTPM: 219.5
Samples: 2
Max nTPM: 244.6
Min nTPM: 194.3
RHH5243_R3615
244.6
RHH5272_R3644
194.3
Terminal effector memory CD8 T-cell nTPM: 199.9
Samples: 4
Max nTPM: 231.9
Min nTPM: 172.3
RHH5232_R3604
214.3
RHH5204_R3575
181.2
RHH5261_R3633
231.9
RHH5296_R3662
172.3
Vd2 gdTCR nTPM: 186.4
Samples: 4
Max nTPM: 217.1
Min nTPM: 141.5
RHH5234_R3606
206.9
RHH5206_R3577
180.0
RHH5263_R3635
217.1
RHH5298_R3664
141.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.