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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
142.2
nTPM
Monaco:
587.9
nTPM
Schmiedel:
463.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
142.2
HPA sample
nTPM
gdT-cell nTPM: 118.9
Samples: 6
Max nTPM: 163.8
Min nTPM: 93.9
P10809_1007
123.2
P10809_1022
163.8
P10809_1041
104.7
P10809_1060
93.9
P10809_1077
124.0
P10809_1098
103.9
MAIT T-cell nTPM: 142.2
Samples: 6
Max nTPM: 180.3
Min nTPM: 119.0
P10809_1006
144.7
P10809_1024
180.3
P10809_1043
119.0
P10809_1062
140.5
P10809_1083
132.7
P10809_1097
135.8
Memory CD4 T-cell nTPM: 121.2
Samples: 6
Max nTPM: 134.8
Min nTPM: 99.8
P10809_1014
134.8
P10809_1026
124.8
P10809_1045
114.7
P10809_1064
124.0
P10809_1086
129.0
P10809_1113
99.8
Memory CD8 T-cell nTPM: 120.0
Samples: 5
Max nTPM: 153.1
Min nTPM: 101.3
P10809_1012
112.6
P10809_1027
153.1
P10809_1046
116.6
P10809_1065
116.2
P10809_1111
101.3
Naive CD4 T-cell nTPM: 121.2
Samples: 6
Max nTPM: 154.5
Min nTPM: 102.0
P10809_1015
154.5
P10809_1030
125.7
P10809_1049
110.0
P10809_1068
119.8
P10809_1085
115.2
P10809_1112
102.0
Naive CD8 T-cell nTPM: 120.1
Samples: 6
Max nTPM: 141.5
Min nTPM: 100.7
P10809_1016
126.0
P10809_1031
125.8
P10809_1050
102.2
P10809_1069
124.4
P10809_1087
141.5
P10809_1110
100.7
T-reg nTPM: 138.2
Samples: 6
Max nTPM: 183.8
Min nTPM: 87.3
P10809_1018
155.6
P10809_1037
183.8
P10809_1056
109.3
P10809_1075
141.2
P10809_1094
151.7
P10809_1106
87.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
587.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 474.5
Samples: 4
Max nTPM: 636.6
Min nTPM: 336.5
RHH5202_R3573
636.6
RHH5230_R3602
424.1
RHH5259_R3631
336.5
RHH5288_R3660
500.6
Effector memory CD8 T-cell nTPM: 548.1
Samples: 4
Max nTPM: 761.1
Min nTPM: 379.3
RHH5203_R3574
761.1
RHH5231_R3603
512.1
RHH5260_R3632
379.3
RHH5289_R3661
539.8
MAIT T-cell nTPM: 587.9
Samples: 4
Max nTPM: 651.7
Min nTPM: 524.1
RHH5233_R3605
524.1
RHH5205_R3576
651.7
RHH5262_R3634
570.3
RHH5297_R3663
605.6
Memory CD4 T-cell TFH nTPM: 440.8
Samples: 4
Max nTPM: 492.6
Min nTPM: 380.0
RHH5300_R3666
477.6
RHH5236_R3608
412.8
RHH5265_R3637
380.0
RHH5208_R3579
492.6
Memory CD4 T-cell Th1 nTPM: 458.4
Samples: 4
Max nTPM: 613.1
Min nTPM: 297.8
RHH5210_R3581
543.8
RHH5302_R3668
613.1
RHH5238_R3610
297.8
RHH5267_R3639
379.0
Memory CD4 T-cell Th1/Th17 nTPM: 502.3
Samples: 4
Max nTPM: 677.2
Min nTPM: 298.6
RHH5303_R3669
620.3
RHH5211_R3582
677.2
RHH5239_R3611
298.6
RHH5268_R3640
413.2
Memory CD4 T-cell Th17 nTPM: 471.1
Samples: 4
Max nTPM: 599.0
Min nTPM: 370.3
RHH5304_R3670
527.1
RHH5212_R3583
599.0
RHH5240_R3612
387.8
RHH5269_R3641
370.3
Memory CD4 T-cell Th2 nTPM: 555.2
Samples: 4
Max nTPM: 669.2
Min nTPM: 488.9
RHH5305_R3671
519.5
RHH5213_R3584
669.2
RHH5241_R3613
543.1
RHH5270_R3642
488.9
Naive CD4 T-cell nTPM: 511.2
Samples: 4
Max nTPM: 618.6
Min nTPM: 412.0
RHH5306_R3672
618.6
RHH5214_R3585
584.9
RHH5242_R3614
412.0
RHH5271_R3643
429.2
Naive CD8 T-cell nTPM: 473.8
Samples: 4
Max nTPM: 664.1
Min nTPM: 263.4
RHH5201_R3572
664.1
RHH5229_R3601
263.4
RHH5258_R3630
466.3
RHH5287_R3659
501.3
Non-Vd2 gdTCR nTPM: 550.1
Samples: 4
Max nTPM: 654.9
Min nTPM: 350.3
RHH5235_R3607
350.3
RHH5264_R3636
634.2
RHH5207_R3578
654.9
RHH5299_R3665
560.9
T-reg nTPM: 435.8
Samples: 4
Max nTPM: 469.7
Min nTPM: 349.6
RHH5301_R3667
467.0
RHH5237_R3609
456.8
RHH5266_R3638
349.6
RHH5209_R3580
469.7
Terminal effector memory CD4 T-cell nTPM: 482.9
Samples: 2
Max nTPM: 589.3
Min nTPM: 376.5
RHH5243_R3615
376.5
RHH5272_R3644
589.3
Terminal effector memory CD8 T-cell nTPM: 558.9
Samples: 4
Max nTPM: 641.2
Min nTPM: 436.8
RHH5232_R3604
532.9
RHH5204_R3575
641.2
RHH5261_R3633
436.8
RHH5296_R3662
624.5
Vd2 gdTCR nTPM: 581.9
Samples: 4
Max nTPM: 768.8
Min nTPM: 473.4
RHH5234_R3606
581.9
RHH5206_R3577
768.8
RHH5263_R3635
473.4
RHH5298_R3664
503.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.