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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
198.2
nTPM
HPA Brain:
126.8
nTPM
GTEx:
198.2
nTPM
FANTOM5:
313.3
Scaled Tags Per Million
Pig:
106.6
nTPM
Mouse:
34.4
nTPM
Allen mouse:
3.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
126.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 85.7
1870
Female, age 42, unknown
107.4
2411
Female, age 72, unknown
99.4
1827
Male, age 72, unknown
98.0
2219
Male, age 76, both hemispheres
89.0
2666
Male, age 74, left hemisphere
88.2
1833
Male, age 53, unknown
85.9
1830
Male, age 51, unknown
84.7
2019
Male, age 18, unknown
74.8
2828
Female, age 72, unknown
68.1
2586
Male, age 75, left hemisphere
61.5
Dorsal raphe nucleus nTPM: 89.9
2750
Male, age 76, both hemispheres
106.6
2298
Female, age 72, unknown
95.3
2047
Male, age 72, unknown
87.1
1828
Male, age 53, unknown
83.4
2016
Female, age 72, unknown
77.1
Inferior colliculus nTPM: 100.3
2849
Male, age 72, unknown
113.5
2097
Female, age 72, unknown
103.0
1848
Female, age 42, unknown
93.5
1890
Male, age 53, unknown
91.4
Median raphe nucleus nTPM: 126.8
2220
Male, age 76, midline
126.8
Periaquaductal grey, anterior nTPM: 98.1
1947
Male, age 18, unknown
109.3
2502
Female, age 75, unknown
96.5
1795
Male, age 51, unknown
88.6
Periaquaductal grey, dorsal nTPM: 99.0
2850
Male, age 76, both hemispheres
110.9
1840
Male, age 53, unknown
108.2
1831
Male, age 72, unknown
89.2
2464
Female, age 72, unknown
87.6
Periaquaductal grey, lateral nTPM: 85.8
2140
Male, age 76, both hemispheres
89.4
2053
Male, age 18, unknown
86.2
2272
Male, age 74, both hemispheres
82.0
Pretectal area nTPM: 99.3
1944
Female, age 72, unknown
119.1
2224
Female, age 72, unknown
110.9
2007
Male, age 72, unknown
107.1
1817
Female, age 42, unknown
104.0
1816
Male, age 51, unknown
103.9
2825
Male, age 18, unknown
99.9
1815
Male, age 53, unknown
98.4
2667
Female, age 75, unknown
91.8
2407
Male, age 75, both hemispheres
88.8
2273
Male, age 74, both hemispheres
86.9
2316
Male, age 76, right hemisphere
81.5
Red nucleus nTPM: 84.1
1821
Female, age 72, unknown
99.6
1954
Female, age 42, unknown
92.8
2725
Female, age 75, unknown
91.0
2503
Female, age 72, unknown
90.2
2823
Male, age 76, right hemisphere
89.3
1865
Male, age 51, unknown
84.1
1904
Male, age 53, unknown
82.5
2227
Male, age 72, unknown
79.9
2769
Male, age 72, unknown
78.8
2785
Male, age 18, unknown
76.8
2584
Male, age 75, left hemisphere
76.2
2588
Male, age 74, left hemisphere
67.9
Substantia nigra nTPM: 97.4
1889
Female, age 72, unknown
112.6
1916
Female, age 42, unknown
111.6
1941
Male, age 53, unknown
110.4
2241
Male, age 72, unknown
107.3
2409
Female, age 72, unknown
100.0
2699
Male, age 18, unknown
99.2
1851
Male, age 51, unknown
97.1
2590
Female, age 75, unknown
82.6
2665
Male, age 74, both hemispheres
78.2
2583
Male, age 75, right hemisphere
74.8
Superior colliculus nTPM: 89.5
2668
Female, age 75, unknown
103.8
1895
Male, age 76, right hemisphere
102.1
2587
Male, age 74, left hemisphere
97.0
2087
Female, age 72, unknown
95.7
2261
Male, age 18, unknown
93.5
1796
Male, age 53, unknown
91.5
1839
Male, age 51, unknown
91.4
1913
Female, age 42, unknown
81.9
1995
Male, age 72, unknown
70.2
2664
Male, age 75, both hemispheres
68.1
Ventral tegmental area nTPM: 97.9
2218
Male, age 76, both hemispheres
108.0
1915
Female, age 42, unknown
101.0
1942
Male, age 51, unknown
98.2
2223
Female, age 72, unknown
96.3
2410
Female, age 72, unknown
95.8
2021
Male, age 53, unknown
88.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
198.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 198.2
Samples: 139
Max nTPM: 390.0
Min nTPM: 102.3
Std nTPM: 44.6
Median nTPM: 198.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
390.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
292.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
282.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
278.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
277.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
268.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
267.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
267.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
266.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
265.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
265.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
263.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
256.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
253.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
252.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
251.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
250.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
247.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
246.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
245.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
244.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
243.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
242.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
242.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
240.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
237.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
237.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
232.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
231.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
231.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
231.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
230.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
229.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
229.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
228.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
226.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
225.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
225.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
224.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
224.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
224.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
223.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
223.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
221.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
220.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
220.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
216.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
215.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
215.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
213.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
213.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
213.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
213.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
211.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
211.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
208.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
208.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
208.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
206.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
206.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
206.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
204.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
203.6
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
202.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
201.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
200.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
199.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
199.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
198.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
198.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
197.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
197.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
196.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
194.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
194.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
193.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
192.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
191.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
189.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
188.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
187.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
187.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
186.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
184.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
182.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
181.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
181.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
180.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
180.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
178.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
177.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
177.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
176.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
176.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
175.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
174.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
172.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
170.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
168.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
168.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
166.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
166.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
166.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
166.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
163.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
161.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
161.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
161.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
159.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
159.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
157.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
157.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
157.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
157.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
155.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
154.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
154.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
153.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
152.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
151.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
150.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
149.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
143.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
141.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
139.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
138.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
138.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
137.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
137.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
136.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
133.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
133.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
133.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
129.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
119.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
117.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
114.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
113.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
102.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
34.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 34.4
Samples: 4
Max nTPM: 37.5
Min nTPM: 32.0
Sample A
Male
37.5
Sample B
Male
33.5
Sample C
Female
32.0
Sample D
Female
34.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.