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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
137.1
nTPM
HPA Brain:
220.2
nTPM
GTEx:
137.1
nTPM
FANTOM5:
91.5
Scaled Tags Per Million
Pig:
126.3
nTPM
Mouse:
81.3
nTPM
Allen mouse:
21.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
220.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 182.8
2586
Male, age 75, left hemisphere
334.6
2828
Female, age 72, unknown
210.8
1827
Male, age 72, unknown
201.2
2666
Male, age 74, left hemisphere
195.1
1870
Female, age 42, unknown
162.5
2219
Male, age 76, both hemispheres
160.7
2411
Female, age 72, unknown
155.1
1830
Male, age 51, unknown
138.1
1833
Male, age 53, unknown
137.2
2019
Male, age 18, unknown
132.7
Dorsal raphe nucleus nTPM: 170.1
2047
Male, age 72, unknown
200.3
2298
Female, age 72, unknown
182.3
1828
Male, age 53, unknown
158.2
2016
Female, age 72, unknown
157.3
2750
Male, age 76, both hemispheres
152.2
Inferior colliculus nTPM: 153.8
2849
Male, age 72, unknown
169.8
1848
Female, age 42, unknown
154.7
2097
Female, age 72, unknown
146.5
1890
Male, age 53, unknown
144.4
Median raphe nucleus nTPM: 180.5
2220
Male, age 76, midline
180.5
Periaquaductal grey, anterior nTPM: 220.2
1795
Male, age 51, unknown
235.0
1947
Male, age 18, unknown
216.7
2502
Female, age 75, unknown
208.9
Periaquaductal grey, dorsal nTPM: 163.0
1840
Male, age 53, unknown
182.3
1831
Male, age 72, unknown
159.3
2850
Male, age 76, both hemispheres
155.8
2464
Female, age 72, unknown
154.5
Periaquaductal grey, lateral nTPM: 165.1
2053
Male, age 18, unknown
174.9
2272
Male, age 74, both hemispheres
161.7
2140
Male, age 76, both hemispheres
158.6
Pretectal area nTPM: 174.7
1816
Male, age 51, unknown
201.3
2007
Male, age 72, unknown
191.5
1944
Female, age 72, unknown
188.7
2825
Male, age 18, unknown
188.5
2224
Female, age 72, unknown
188.2
2407
Male, age 75, both hemispheres
182.0
2667
Female, age 75, unknown
167.8
1815
Male, age 53, unknown
162.6
1817
Female, age 42, unknown
158.4
2273
Male, age 74, both hemispheres
154.3
2316
Male, age 76, right hemisphere
138.0
Red nucleus nTPM: 140.4
2584
Male, age 75, left hemisphere
192.2
2725
Female, age 75, unknown
176.7
2588
Male, age 74, left hemisphere
167.9
2769
Male, age 72, unknown
144.9
2785
Male, age 18, unknown
144.4
2503
Female, age 72, unknown
139.7
2227
Male, age 72, unknown
135.8
1904
Male, age 53, unknown
129.9
1954
Female, age 42, unknown
122.6
1865
Male, age 51, unknown
116.6
1821
Female, age 72, unknown
108.9
2823
Male, age 76, right hemisphere
105.1
Substantia nigra nTPM: 164.1
1916
Female, age 42, unknown
235.4
1941
Male, age 53, unknown
183.1
1851
Male, age 51, unknown
182.5
2583
Male, age 75, right hemisphere
169.2
2665
Male, age 74, both hemispheres
167.9
2699
Male, age 18, unknown
159.4
1889
Female, age 72, unknown
155.3
2590
Female, age 75, unknown
140.2
2241
Male, age 72, unknown
126.2
2409
Female, age 72, unknown
121.5
Superior colliculus nTPM: 179.4
2664
Male, age 75, both hemispheres
302.2
1796
Male, age 53, unknown
209.6
2261
Male, age 18, unknown
196.7
1839
Male, age 51, unknown
176.3
2587
Male, age 74, left hemisphere
171.6
2668
Female, age 75, unknown
170.5
2087
Female, age 72, unknown
166.7
1913
Female, age 42, unknown
138.6
1995
Male, age 72, unknown
133.1
1895
Male, age 76, right hemisphere
128.7
Ventral tegmental area nTPM: 171.8
1915
Female, age 42, unknown
189.8
2021
Male, age 53, unknown
184.6
1942
Male, age 51, unknown
181.6
2223
Female, age 72, unknown
160.5
2218
Male, age 76, both hemispheres
159.4
2410
Female, age 72, unknown
154.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
137.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 137.1
Samples: 139
Max nTPM: 234.8
Min nTPM: 58.8
Std nTPM: 36.6
Median nTPM: 134.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
234.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
229.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
222.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
220.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
219.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
209.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
206.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
202.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
201.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
194.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
193.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
190.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
188.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
185.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
180.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
176.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
176.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
175.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
175.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
174.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
171.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
169.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
169.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
167.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
167.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
166.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
166.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
165.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
165.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
165.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
165.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
162.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
162.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
161.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
159.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
159.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
157.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
157.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
157.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
156.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
155.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
155.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
153.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
152.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
151.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
151.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
150.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
150.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
150.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
149.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
148.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
148.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
146.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
146.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
145.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
144.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
144.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
144.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
143.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
142.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
142.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
142.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
141.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
141.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
138.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
138.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
137.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
136.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
134.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
134.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
134.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
133.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
133.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
133.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
133.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
133.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
132.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
131.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
131.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
130.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
130.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
130.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
129.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
129.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
128.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
128.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
127.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
126.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
125.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
124.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
123.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
123.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
122.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
122.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
122.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
120.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
119.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
118.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
116.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
116.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
115.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
115.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
114.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
114.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
113.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
110.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
108.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
108.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
108.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
107.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
105.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
104.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
102.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
102.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
101.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
100.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
99.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
99.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
99.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
99.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
98.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
96.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
94.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
90.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
90.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
88.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
83.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
82.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
82.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
82.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
81.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
79.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
78.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
72.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
67.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
65.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
63.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
62.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
58.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
81.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 81.4
Samples: 4
Max nTPM: 90.9
Min nTPM: 73.7
Sample A
Male
90.9
Sample B
Male
73.7
Sample C
Female
78.3
Sample D
Female
82.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.