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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Medium
Neuronal cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
2129.5
nTPM
HPA Brain:
1641.5
nTPM
GTEx:
2129.5
nTPM
FANTOM5:
3307.6
Scaled Tags Per Million
Mouse:
3707.0
nTPM
Allen mouse:
6.5
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA004938
Antibody HPA067456
Antibody CAB009916
Glial cells
Low
Medium
Medium
Neuronal cells
High
Medium
Not detected
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
1641.5
Sample id
Sample description
nTPM
Hippocampus nTPM: 1489.8
2529
Female, age 94, left hemisphere
1782.9
1911
Female, age 85, right hemisphere
1527.8
2148
Female, age 91, left hemisphere
1462.7
1898
Male, age 80, left hemisphere
1454.4
1855
Male, age 76, left hemisphere
1378.2
2621
Female, age 67, right hemisphere
1333.1
Dentate gyrus nTPM: 1396.5
2530
Female, age 94, left hemisphere
2231.1
2528
Male, age 74, both hemispheres
1798.4
2010
Male, age 76, both hemispheres
1315.3
2246
Female, age 85, both hemispheres
1267.9
1927
Female, age 91, both hemispheres
899.8
2531
Female, age 67, both hemispheres
866.5
Entorhinal gyrus nTPM: 1412.4
2117
Female, age 91, right hemisphere
2469.5
2764
Male, age 80, right hemisphere
1428.2
1787
Male, age 76, left hemisphere
1346.2
1938
Female, age 85, left hemisphere
1312.0
2613
Female, age 94, left hemisphere
986.4
2686
Male, age 75, right hemisphere
932.0
Hippocampus, CA1 nTPM: 1217.3
2527
Male, age 74, both hemispheres
1812.1
1873
Female, age 85, both hemispheres
1253.2
2082
Female, age 91, right hemisphere
1071.1
2045
Male, age 76, both hemispheres
986.9
2749
Male, age 80, left hemisphere
963.3
Hippocampus, CA2 nTPM: 1369.6
2249
Male, age 74, both hemispheres
1824.5
2437
Female, age 94, left hemisphere
1499.6
1963
Male, age 80, left hemisphere
1443.7
1940
Female, age 85, left hemisphere
1400.0
2113
Female, age 91, right hemisphere
1261.6
1892
Male, age 76, both hemispheres
788.3
Hippocampus, CA3 nTPM: 1175.4
1891
Female, age 85, both hemispheres
1590.5
2620
Female, age 94, left hemisphere
1368.7
2436
Male, age 74, both hemispheres
1334.2
1867
Male, age 76, both hemispheres
1044.9
2861
Female, age 67, both hemispheres
942.8
2137
Male, age 80, left hemisphere
771.0
Parahippocampal cortex nTPM: 1270.0
2692
Male, age 74, both hemispheres
1636.8
1990
Female, age 91, right hemisphere
1630.6
2532
Female, age 72, left hemisphere
1313.0
2018
Male, age 76, both hemispheres
1272.9
2250
Female, age 67, right hemisphere
1236.3
2622
Female, age 67, right hemisphere
1183.1
1933
Female, age 85, both hemispheres
1176.9
2245
Female, age 91, both hemispheres
1163.5
1850
Male, age 80, both hemispheres
1124.7
2693
Female, age 94, both hemispheres
961.8
Perirhinal gyrus nTPM: 958.8
1794
Male, age 80, right hemisphere
1172.3
2521
Female, age 94, right hemisphere
960.4
1847
Female, age 91, left hemisphere
928.2
1841
Female, age 85, right hemisphere
876.0
2848
Male, age 76, right hemisphere
857.2
Subiculum nTPM: 1641.5
2619
Male, age 74, both hemispheres
2007.3
2042
Male, age 76, both hemispheres
1737.7
2729
Female, age 91, right hemisphere
1684.5
1901
Male, age 80, both hemispheres
1634.2
1977
Female, age 85, both hemispheres
1467.7
2438
Female, age 94, left hemisphere
1317.7
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
2129.5
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 2129.5
Samples: 197
Max nTPM: 5006.0
Min nTPM: 348.2
Std nTPM: 765.7
Median nTPM: 2039.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
5006.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
4298.2
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
4106.7
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
4005.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
3994.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
3930.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
3604.2
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
3451.7
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
3428.1
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
3341.3
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
3334.3
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
3330.1
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
3329.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
3286.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
3275.7
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
3245.3
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
3216.1
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
3205.2
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
3170.1
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
3148.7
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
3145.5
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
3055.8
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
2996.4
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
2989.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
2923.5
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
2920.4
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
2918.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
2886.6
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
2881.5
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
2879.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
2878.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
2868.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
2864.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
2840.9
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
2837.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
2826.1
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
2824.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
2824.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
2819.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
2782.4
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
2765.2
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
2754.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
2743.8
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
2740.5
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
2737.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
2736.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
2725.0
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
2722.8
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
2716.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
2706.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
2623.1
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
2610.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
2610.5
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
2574.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
2557.7
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
2545.6
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
2536.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
2535.2
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
2528.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
2516.9
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
2514.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
2512.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
2449.2
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
2436.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
2429.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
2417.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
2412.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
2401.7
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
2397.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
2379.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
2345.2
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
2333.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
2330.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
2325.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
2314.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
2306.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
2288.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
2287.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
2282.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
2277.5
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2263.1
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
2240.9
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
2237.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
2216.6
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
2184.9
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
2171.8
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
2140.6
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
2128.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
2128.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
2124.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
2122.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
2120.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
2117.5
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
2109.4
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
2106.6
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
2103.1
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
2085.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
2081.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
2039.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
2034.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
2012.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
2007.2
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
2006.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
2006.0
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
1995.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
1995.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
1986.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
1976.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
1953.4
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
1941.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
1934.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
1915.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
1903.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
1899.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
1879.6
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
1873.1
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
1871.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
1869.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
1866.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
1856.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
1848.8
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
1848.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1845.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
1818.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1808.4
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
1804.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
1803.2
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
1798.8
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
1793.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
1778.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
1767.6
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1751.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1732.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
1716.4
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
1712.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
1711.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
1684.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
1683.4
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
1683.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
1670.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
1659.3
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
1651.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1643.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
1631.1
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
1585.2
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
1576.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1573.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1571.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1565.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
1558.8
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
1557.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
1539.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1529.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
1522.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
1482.3
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
1481.0
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
1476.2
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
1468.0
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
1460.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
1456.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
1450.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
1445.7
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1437.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
1425.4
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
1400.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
1333.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
1331.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
1310.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
1310.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
1302.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
1252.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
1250.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
1248.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
1244.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
1216.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
1211.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
1204.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
1190.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
1173.0
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
1155.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
1131.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
1117.5
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
1115.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
1103.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
1094.3
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
1063.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
1058.0
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
966.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
947.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
936.3
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
896.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
850.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
834.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
829.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
736.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
726.2
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
348.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
3707.0
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 3707.0
Samples: 4
Max nTPM: 4610.0
Min nTPM: 2856.1
Sample A
Male
2856.1
Sample B
Male
3475.7
Sample C
Female
3886.0
Sample D
Female
4610.0
Hippocampal formation nTPM: 1572.2
Samples: 4
Max nTPM: 2028.9
Min nTPM: 1103.3
Sample A
Male
1794.2
Sample B
Male
1103.3
Sample C
Female
1362.2
Sample D
Female
2028.9
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.