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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
106.1
nTPM
HPA Brain:
243.4
nTPM
GTEx:
106.1
nTPM
FANTOM5:
404.3
Scaled Tags Per Million
Pig:
199.9
nTPM
Mouse:
471.6
nTPM
Allen mouse:
7.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
243.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 200.4
1827
Male, age 72, unknown
231.4
2666
Male, age 74, left hemisphere
221.1
2411
Female, age 72, unknown
218.7
2019
Male, age 18, unknown
214.1
1870
Female, age 42, unknown
197.9
1833
Male, age 53, unknown
189.8
2219
Male, age 76, both hemispheres
186.3
2586
Male, age 75, left hemisphere
184.3
1830
Male, age 51, unknown
183.1
2828
Female, age 72, unknown
176.9
Dorsal raphe nucleus nTPM: 186.3
2750
Male, age 76, both hemispheres
206.1
2298
Female, age 72, unknown
198.8
1828
Male, age 53, unknown
191.0
2047
Male, age 72, unknown
181.0
2016
Female, age 72, unknown
154.6
Inferior colliculus nTPM: 178.9
2097
Female, age 72, unknown
205.2
1890
Male, age 53, unknown
184.2
2849
Male, age 72, unknown
164.8
1848
Female, age 42, unknown
161.4
Median raphe nucleus nTPM: 243.4
2220
Male, age 76, midline
243.4
Periaquaductal grey, anterior nTPM: 186.7
2502
Female, age 75, unknown
190.7
1947
Male, age 18, unknown
185.8
1795
Male, age 51, unknown
183.5
Periaquaductal grey, dorsal nTPM: 182.0
2850
Male, age 76, both hemispheres
203.7
1831
Male, age 72, unknown
201.8
1840
Male, age 53, unknown
162.6
2464
Female, age 72, unknown
160.0
Periaquaductal grey, lateral nTPM: 175.9
2272
Male, age 74, both hemispheres
183.6
2053
Male, age 18, unknown
181.2
2140
Male, age 76, both hemispheres
163.0
Pretectal area nTPM: 223.5
1816
Male, age 51, unknown
301.2
1815
Male, age 53, unknown
278.7
1817
Female, age 42, unknown
277.2
2007
Male, age 72, unknown
265.6
1944
Female, age 72, unknown
263.9
2224
Female, age 72, unknown
192.4
2667
Female, age 75, unknown
191.4
2273
Male, age 74, both hemispheres
187.3
2825
Male, age 18, unknown
176.4
2407
Male, age 75, both hemispheres
176.0
2316
Male, age 76, right hemisphere
148.0
Red nucleus nTPM: 200.1
1821
Female, age 72, unknown
235.4
2584
Male, age 75, left hemisphere
221.4
2725
Female, age 75, unknown
216.5
2785
Male, age 18, unknown
212.2
2588
Male, age 74, left hemisphere
211.5
2503
Female, age 72, unknown
199.8
1954
Female, age 42, unknown
199.1
1865
Male, age 51, unknown
195.3
2823
Male, age 76, right hemisphere
192.1
1904
Male, age 53, unknown
183.9
2769
Male, age 72, unknown
167.4
2227
Male, age 72, unknown
165.9
Substantia nigra nTPM: 228.9
1889
Female, age 72, unknown
258.3
1916
Female, age 42, unknown
249.4
1941
Male, age 53, unknown
245.5
2241
Male, age 72, unknown
241.8
1851
Male, age 51, unknown
232.2
2409
Female, age 72, unknown
220.7
2665
Male, age 74, both hemispheres
218.0
2699
Male, age 18, unknown
210.9
2583
Male, age 75, right hemisphere
208.0
2590
Female, age 75, unknown
203.9
Superior colliculus nTPM: 196.0
2668
Female, age 75, unknown
223.1
2261
Male, age 18, unknown
221.5
2087
Female, age 72, unknown
215.7
1913
Female, age 42, unknown
207.1
2587
Male, age 74, left hemisphere
206.2
1796
Male, age 53, unknown
190.9
1995
Male, age 72, unknown
183.7
1839
Male, age 51, unknown
174.6
2664
Male, age 75, both hemispheres
170.2
1895
Male, age 76, right hemisphere
167.1
Ventral tegmental area nTPM: 219.6
2218
Male, age 76, both hemispheres
254.0
2410
Female, age 72, unknown
235.7
2223
Female, age 72, unknown
223.4
1915
Female, age 42, unknown
216.7
1942
Male, age 51, unknown
195.6
2021
Male, age 53, unknown
192.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
106.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 106.1
Samples: 139
Max nTPM: 185.6
Min nTPM: 64.2
Std nTPM: 21.2
Median nTPM: 104.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
185.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
166.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
166.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
154.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
154.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
152.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
147.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
144.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
140.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
140.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
137.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
134.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
132.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
132.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
132.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
132.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
131.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
129.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
127.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
126.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
126.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
126.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
125.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
122.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
122.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
121.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
121.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
121.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
120.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
120.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
120.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
119.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
119.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
118.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
118.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
117.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
116.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
115.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
115.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
114.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
114.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
114.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
114.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
113.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
113.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
113.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
113.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
112.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
112.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
111.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
110.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
110.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
110.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
109.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
108.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
108.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
108.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
108.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
107.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
107.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
107.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
106.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
106.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
106.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
106.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
105.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
105.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
105.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
105.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
104.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
104.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
103.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
103.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
102.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
102.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
102.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
102.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
101.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
101.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
101.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
100.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
100.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
100.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
100.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
99.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
98.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
98.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
98.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
98.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
97.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
96.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
96.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
96.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
94.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
94.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
94.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
94.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
93.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
92.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
92.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
92.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
91.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
91.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
90.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
89.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
88.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
88.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
88.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
88.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
88.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
87.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
87.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
86.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
86.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
86.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
86.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
86.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
85.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
85.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
84.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
84.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
84.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
82.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
81.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
80.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
80.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
79.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
79.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
78.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
77.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
77.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
77.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
76.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
76.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
73.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
72.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
70.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
67.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
64.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
471.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 471.6
Samples: 4
Max nTPM: 481.7
Min nTPM: 457.7
Sample A
Male
457.7
Sample B
Male
479.2
Sample C
Female
481.7
Sample D
Female
467.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.