CARS

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:15.2 FPKM
GTEx:10.9 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Low
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002383

 

Antibody HPA002384

 

Antibody CAB075734

 

Antibody CAB075735

 

Antibody CAB075736

 

Antibody CAB075737

 

Fibroblasts

Not detected   Not detected   Low   Medium   Low   High  

Keratinocytes

Low   Not detected   Not detected   Low   Low   Low  

Langerhans

Low   Not detected   Not detected   High   Low   Medium  

Melanocytes

Low   Not detected   Not detected   Medium   Medium   Low  
           
           
           

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Low
 
 
 
 

Antibody staining

Antibody HPA002383

 

Antibody HPA002384

 

Antibody CAB075734

 

Antibody CAB075735

 

Antibody CAB075736

 

Antibody CAB075737

 

Epidermal cells

Low   Low   Not detected   Low   Low   Low  
              
              
              
           
           
           

SKIN - HPA RNA-seq

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Average FPKM

15.2

overview Female, age 34
Sample 1
FPKM: 15.5
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 18.0
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 12.1

SKIN - GTEx RNA-seq

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Average RPKM

10.9

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 10.6
Samples: 250

Max RPKM: 18.9
Min RPKM: 6.5
Std RPKM: 2.2
Median RPKM: 10.5
GTEX-WYJK-0526-SM-3NM8Z 18.9
GTEX-12584-0726-SM-5FQTK 18.7
GTEX-ZAB4-2126-SM-5HL8U 17.9
GTEX-WFON-1926-SM-3LK7L 17.8
GTEX-11WQK-1026-SM-5EQLX 17.8
GTEX-ZVZP-1226-SM-5GID7 17.1
GTEX-WH7G-2026-SM-3NMBL 15.7
GTEX-11O72-0626-SM-5PNYE 15.5
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 11.2
Samples: 357

Max RPKM: 25.2
Min RPKM: 7
Std RPKM: 2.3
Median RPKM: 11
GTEX-ZXES-1826-SM-5E43S 25.2
GTEX-1122O-2126-SM-5EGIR 22.4
GTEX-OOBK-0126-SM-2YUND 22.0
GTEX-111CU-1926-SM-5GZYZ 18.5
GTEX-ZQUD-1426-SM-57WER 18.3
GTEX-YB5E-2026-SM-5IFIS 17.4
GTEX-WI4N-1026-SM-3LK7N 17.3
GTEX-ZGAY-0526-SM-4WWBB 17.1
Show all