AIM1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:18.5 FPKM
GTEx:6.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA030948

 

Antibody HPA030949

 

Antibody CAB026378

 

Endothelial cells

Not available   Low   Not detected  

Glandular cells

High   High   Medium  

Peripheral nerve/ganglion

Not available   Medium   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

18.5

overview Male, age 54
Sample 1
FPKM: 12.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 17.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 29.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 28.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

6.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.0
Samples: 149

Max RPKM: 5.1
Min RPKM: 0.4
Std RPKM: 0.9
Median RPKM: 1.8
GTEX-13X6I-2726-SM-5Q5ET 5.1
GTEX-Y5LM-1426-SM-5RQJL 5.1
GTEX-11TT1-0926-SM-5GU5M 4.9
GTEX-12ZZY-2726-SM-5EQ45 4.3
GTEX-XUZC-1526-SM-4BRV4 4.2
GTEX-13O61-1526-SM-5KM3P 4.1
GTEX-XV7Q-2226-SM-4BRVY 3.9
GTEX-13111-1926-SM-5GCOL 3.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 11.0
Samples: 196

Max RPKM: 25.6
Min RPKM: 0.6
Std RPKM: 7
Median RPKM: 12.3
GTEX-XMK1-1726-SM-4B64Z 25.6
GTEX-145MN-1726-SM-5SIA6 25.0
GTEX-WFG7-1526-SM-4LVMG 25.0
GTEX-13O21-2426-SM-5MR4A 23.6
GTEX-OXRK-1726-SM-3NB16 23.4
GTEX-Y5LM-1526-SM-4VDTA 23.1
GTEX-WHWD-1226-SM-4OOS1 23.1
GTEX-139YR-2126-SM-5KM11 22.4
Show all