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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
87.6
nTPM
HPA Brain:
246.9
nTPM
GTEx:
87.6
nTPM
FANTOM5:
271.3
Scaled Tags Per Million
Pig:
299.6
nTPM
Mouse:
327.8
nTPM
Allen mouse:
16.5
Expression energy
HIPPOCAMPUS - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA054560
Glial cells
Not detected
Neuronal cells
High
Neuronal projections
Low
Synapses
Medium
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA054560
Glial cells
Not detected
Neuronal cells
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
246.9
Sample id
Sample description
nTPM
Hippocampus nTPM: 193.1
2621
Female, age 67, right hemisphere
242.9
1898
Male, age 80, left hemisphere
233.0
1855
Male, age 76, left hemisphere
209.1
1911
Female, age 85, right hemisphere
171.8
2148
Female, age 91, left hemisphere
163.2
2529
Female, age 94, left hemisphere
138.4
Dentate gyrus nTPM: 190.9
1927
Female, age 91, both hemispheres
274.9
2530
Female, age 94, left hemisphere
251.5
2246
Female, age 85, both hemispheres
182.5
2010
Male, age 76, both hemispheres
159.0
2528
Male, age 74, both hemispheres
143.7
2531
Female, age 67, both hemispheres
133.5
Entorhinal gyrus nTPM: 137.5
2613
Female, age 94, left hemisphere
253.4
1938
Female, age 85, left hemisphere
149.4
2764
Male, age 80, right hemisphere
131.4
1787
Male, age 76, left hemisphere
127.2
2686
Male, age 75, right hemisphere
85.2
2117
Female, age 91, right hemisphere
78.5
Hippocampus, CA1 nTPM: 246.9
2749
Male, age 80, left hemisphere
463.2
1873
Female, age 85, both hemispheres
233.3
2527
Male, age 74, both hemispheres
226.5
2082
Female, age 91, right hemisphere
198.8
2045
Male, age 76, both hemispheres
112.8
Hippocampus, CA2 nTPM: 196.0
1963
Male, age 80, left hemisphere
232.8
1892
Male, age 76, both hemispheres
230.4
2437
Female, age 94, left hemisphere
199.9
2249
Male, age 74, both hemispheres
188.7
2113
Female, age 91, right hemisphere
180.8
1940
Female, age 85, left hemisphere
143.6
Hippocampus, CA3 nTPM: 209.3
2137
Male, age 80, left hemisphere
424.6
2436
Male, age 74, both hemispheres
209.2
2861
Female, age 67, both hemispheres
195.4
2620
Female, age 94, left hemisphere
164.4
1867
Male, age 76, both hemispheres
149.0
1891
Female, age 85, both hemispheres
113.4
Parahippocampal cortex nTPM: 143.5
2245
Female, age 91, both hemispheres
303.9
2250
Female, age 67, right hemisphere
209.9
1933
Female, age 85, both hemispheres
148.5
1990
Female, age 91, right hemisphere
145.9
2693
Female, age 94, both hemispheres
122.4
1850
Male, age 80, both hemispheres
113.7
2018
Male, age 76, both hemispheres
112.3
2532
Female, age 72, left hemisphere
96.8
2622
Female, age 67, right hemisphere
92.8
2692
Male, age 74, both hemispheres
88.5
Perirhinal gyrus nTPM: 174.0
1847
Female, age 91, left hemisphere
296.2
2521
Female, age 94, right hemisphere
243.1
1794
Male, age 80, right hemisphere
131.6
1841
Female, age 85, right hemisphere
113.8
2848
Male, age 76, right hemisphere
85.3
Subiculum nTPM: 144.7
1901
Male, age 80, both hemispheres
214.3
1977
Female, age 85, both hemispheres
160.9
2438
Female, age 94, left hemisphere
154.4
2042
Male, age 76, both hemispheres
149.7
2619
Male, age 74, both hemispheres
107.1
2729
Female, age 91, right hemisphere
81.8
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
87.6
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 87.6
Samples: 197
Max nTPM: 331.2
Min nTPM: 0.8
Std nTPM: 72.3
Median nTPM: 69.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
331.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
322.1
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
302.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
297.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
292.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
278.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
274.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
266.5
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
263.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
258.1
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
233.6
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
226.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
225.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
223.2
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
221.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
217.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
212.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
207.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
197.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
189.9
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
186.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
186.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
186.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
181.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
179.3
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
174.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
171.9
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
160.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
159.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
159.3
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
158.2
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
155.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
155.3
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
153.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
151.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
150.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
148.4
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
140.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
140.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
140.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
131.7
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
129.3
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
127.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
123.3
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
121.4
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
120.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
116.4
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
115.3
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
115.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
114.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
113.4
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
111.5
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
111.5
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
111.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
111.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
110.5
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
106.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
105.2
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
103.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
102.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
101.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
100.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
99.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
99.3
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
98.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
97.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
96.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
94.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
94.2
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
94.0
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
93.8
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
93.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
93.1
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
90.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
90.0
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
89.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
89.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
88.8
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
83.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
83.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
82.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
81.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
81.5
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
81.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
81.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
81.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
80.0
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
79.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
79.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
77.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
74.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
73.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
73.9
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
73.9
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
73.5
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
73.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
70.5
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
70.4
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
69.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
69.4
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
69.2
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
69.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
68.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
68.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
67.2
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
64.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
62.8
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
61.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
60.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
60.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
60.2
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
59.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
58.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
56.8
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
55.8
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
55.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
55.0
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
54.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
54.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
53.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
53.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
53.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
50.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
49.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
49.1
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
49.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
48.9
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
48.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
47.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
46.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
45.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
45.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
44.7
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
44.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
44.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
44.3
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
42.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
42.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
41.4
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
41.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
39.7
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
39.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
39.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
38.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
38.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
37.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
37.3
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
35.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
34.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
31.7
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
30.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
30.8
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
30.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
30.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
29.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
29.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
29.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
28.8
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
28.7
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
27.6
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
27.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
26.7
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
25.2
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
22.0
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
20.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
20.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
19.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
19.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
17.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
16.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
15.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
14.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
14.6
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
14.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
13.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
13.2
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
13.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
12.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
12.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
11.0
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
10.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
9.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
8.2
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
7.9
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
7.7
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
7.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
6.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
6.9
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
6.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
5.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
5.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
4.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
4.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
3.1
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
3.1
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
1.2
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
0.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
327.8
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 203.5
Samples: 4
Max nTPM: 267.9
Min nTPM: 155.8
Sample A
Male
175.7
Sample B
Male
155.8
Sample C
Female
214.6
Sample D
Female
267.9
Hippocampal formation nTPM: 327.8
Samples: 4
Max nTPM: 395.3
Min nTPM: 267.7
Sample A
Male
267.7
Sample B
Male
364.8
Sample C
Female
395.3
Sample D
Female
283.4
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.