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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
493.4
nTPM
Monaco:
859.9
nTPM
Schmiedel:
318.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
493.4
HPA sample
nTPM
gdT-cell nTPM: 385.7
Samples: 6
Max nTPM: 444.9
Min nTPM: 325.2
P10809_1007
356.4
P10809_1022
444.9
P10809_1041
421.0
P10809_1060
325.2
P10809_1077
407.2
P10809_1098
359.3
MAIT T-cell nTPM: 223.4
Samples: 6
Max nTPM: 240.9
Min nTPM: 210.1
P10809_1006
240.9
P10809_1024
219.8
P10809_1043
236.4
P10809_1062
212.6
P10809_1083
210.1
P10809_1097
220.5
Memory CD4 T-cell nTPM: 250.2
Samples: 6
Max nTPM: 290.4
Min nTPM: 210.9
P10809_1014
252.9
P10809_1026
286.3
P10809_1045
210.9
P10809_1064
290.4
P10809_1086
246.2
P10809_1113
214.4
Memory CD8 T-cell nTPM: 347.4
Samples: 5
Max nTPM: 413.9
Min nTPM: 275.1
P10809_1012
347.3
P10809_1027
413.9
P10809_1046
340.5
P10809_1065
360.0
P10809_1111
275.1
Naive CD4 T-cell nTPM: 162.0
Samples: 6
Max nTPM: 183.9
Min nTPM: 136.4
P10809_1015
166.9
P10809_1030
152.7
P10809_1049
136.4
P10809_1068
159.9
P10809_1085
183.9
P10809_1112
172.4
Naive CD8 T-cell nTPM: 261.9
Samples: 6
Max nTPM: 326.7
Min nTPM: 197.7
P10809_1016
235.2
P10809_1031
244.5
P10809_1050
252.0
P10809_1069
315.5
P10809_1087
326.7
P10809_1110
197.7
T-reg nTPM: 493.5
Samples: 6
Max nTPM: 600.5
Min nTPM: 393.9
P10809_1018
600.5
P10809_1037
471.2
P10809_1056
516.2
P10809_1075
393.9
P10809_1094
489.8
P10809_1106
489.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
859.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 444.3
Samples: 4
Max nTPM: 540.8
Min nTPM: 302.7
RHH5202_R3573
534.6
RHH5230_R3602
399.1
RHH5259_R3631
302.7
RHH5288_R3660
540.8
Effector memory CD8 T-cell nTPM: 845.5
Samples: 4
Max nTPM: 940.7
Min nTPM: 598.0
RHH5203_R3574
904.6
RHH5231_R3603
940.7
RHH5260_R3632
598.0
RHH5289_R3661
938.6
MAIT T-cell nTPM: 497.3
Samples: 4
Max nTPM: 552.3
Min nTPM: 426.3
RHH5233_R3605
552.3
RHH5205_R3576
426.3
RHH5262_R3634
514.3
RHH5297_R3663
496.4
Memory CD4 T-cell TFH nTPM: 431.0
Samples: 4
Max nTPM: 469.4
Min nTPM: 358.3
RHH5300_R3666
427.9
RHH5236_R3608
469.4
RHH5265_R3637
358.3
RHH5208_R3579
468.4
Memory CD4 T-cell Th1 nTPM: 459.8
Samples: 4
Max nTPM: 576.0
Min nTPM: 393.8
RHH5210_R3581
465.5
RHH5302_R3668
576.0
RHH5238_R3610
393.8
RHH5267_R3639
404.0
Memory CD4 T-cell Th1/Th17 nTPM: 451.3
Samples: 4
Max nTPM: 624.0
Min nTPM: 261.2
RHH5303_R3669
624.0
RHH5211_R3582
544.8
RHH5239_R3611
261.2
RHH5268_R3640
375.3
Memory CD4 T-cell Th17 nTPM: 435.2
Samples: 4
Max nTPM: 505.6
Min nTPM: 345.6
RHH5304_R3670
505.6
RHH5212_R3583
480.8
RHH5240_R3612
408.7
RHH5269_R3641
345.6
Memory CD4 T-cell Th2 nTPM: 509.7
Samples: 4
Max nTPM: 539.2
Min nTPM: 477.8
RHH5305_R3671
539.2
RHH5213_R3584
504.3
RHH5241_R3613
517.4
RHH5270_R3642
477.8
Naive CD4 T-cell nTPM: 400.1
Samples: 4
Max nTPM: 457.7
Min nTPM: 318.4
RHH5306_R3672
440.8
RHH5214_R3585
383.6
RHH5242_R3614
457.7
RHH5271_R3643
318.4
Naive CD8 T-cell nTPM: 371.9
Samples: 4
Max nTPM: 441.6
Min nTPM: 236.3
RHH5201_R3572
441.6
RHH5229_R3601
236.3
RHH5258_R3630
414.1
RHH5287_R3659
395.4
Non-Vd2 gdTCR nTPM: 859.9
Samples: 4
Max nTPM: 929.4
Min nTPM: 771.3
RHH5235_R3607
771.3
RHH5264_R3636
885.3
RHH5207_R3578
929.4
RHH5299_R3665
853.5
T-reg nTPM: 477.7
Samples: 4
Max nTPM: 604.2
Min nTPM: 390.2
RHH5301_R3667
506.0
RHH5237_R3609
604.2
RHH5266_R3638
410.5
RHH5209_R3580
390.2
Terminal effector memory CD4 T-cell nTPM: 753.2
Samples: 2
Max nTPM: 767.8
Min nTPM: 738.6
RHH5243_R3615
738.6
RHH5272_R3644
767.8
Terminal effector memory CD8 T-cell nTPM: 851.7
Samples: 4
Max nTPM: 1045.8
Min nTPM: 732.0
RHH5232_R3604
1045.8
RHH5204_R3575
738.6
RHH5261_R3633
732.0
RHH5296_R3662
890.3
Vd2 gdTCR nTPM: 633.3
Samples: 4
Max nTPM: 740.0
Min nTPM: 543.6
RHH5234_R3606
679.2
RHH5206_R3577
740.0
RHH5263_R3635
543.6
RHH5298_R3664
570.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.