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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
99.0
nTPM
HPA Brain:
362.3
nTPM
GTEx:
99.0
nTPM
FANTOM5:
83.0
Scaled Tags Per Million
Pig:
136.9
nTPM
Mouse:
113.3
nTPM
Allen mouse:
6.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
362.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 140.5
2411
Female, age 72, unknown
178.5
1827
Male, age 72, unknown
176.5
2219
Male, age 76, both hemispheres
165.9
1870
Female, age 42, unknown
152.9
1833
Male, age 53, unknown
150.7
2666
Male, age 74, left hemisphere
148.7
2586
Male, age 75, left hemisphere
147.1
2828
Female, age 72, unknown
140.8
1830
Male, age 51, unknown
127.3
2019
Male, age 18, unknown
17.3
Dorsal raphe nucleus nTPM: 217.2
2298
Female, age 72, unknown
316.6
2047
Male, age 72, unknown
232.0
2750
Male, age 76, both hemispheres
201.0
1828
Male, age 53, unknown
169.6
2016
Female, age 72, unknown
166.7
Inferior colliculus nTPM: 136.9
2849
Male, age 72, unknown
178.8
2097
Female, age 72, unknown
145.1
1848
Female, age 42, unknown
119.4
1890
Male, age 53, unknown
104.3
Median raphe nucleus nTPM: 362.3
2220
Male, age 76, midline
362.3
Periaquaductal grey, anterior nTPM: 285.0
2502
Female, age 75, unknown
299.7
1795
Male, age 51, unknown
280.1
1947
Male, age 18, unknown
275.0
Periaquaductal grey, dorsal nTPM: 256.2
1840
Male, age 53, unknown
338.6
2850
Male, age 76, both hemispheres
304.5
1831
Male, age 72, unknown
208.3
2464
Female, age 72, unknown
173.6
Periaquaductal grey, lateral nTPM: 298.5
2053
Male, age 18, unknown
458.4
2140
Male, age 76, both hemispheres
262.5
2272
Male, age 74, both hemispheres
174.6
Pretectal area nTPM: 232.2
2825
Male, age 18, unknown
454.1
2224
Female, age 72, unknown
288.7
2407
Male, age 75, both hemispheres
250.3
1816
Male, age 51, unknown
247.2
1815
Male, age 53, unknown
238.9
2667
Female, age 75, unknown
228.3
2273
Male, age 74, both hemispheres
211.8
1817
Female, age 42, unknown
166.9
1944
Female, age 72, unknown
164.1
2316
Male, age 76, right hemisphere
163.5
2007
Male, age 72, unknown
140.2
Red nucleus nTPM: 45.3
2584
Male, age 75, left hemisphere
149.6
2725
Female, age 75, unknown
78.4
2588
Male, age 74, left hemisphere
68.4
2227
Male, age 72, unknown
38.7
2769
Male, age 72, unknown
38.3
2503
Female, age 72, unknown
34.9
1821
Female, age 72, unknown
27.3
1954
Female, age 42, unknown
22.6
2823
Male, age 76, right hemisphere
22.5
1904
Male, age 53, unknown
21.4
1865
Male, age 51, unknown
20.7
2785
Male, age 18, unknown
20.6
Substantia nigra nTPM: 130.3
2699
Male, age 18, unknown
229.5
1889
Female, age 72, unknown
148.8
2665
Male, age 74, both hemispheres
142.8
1851
Male, age 51, unknown
131.6
2241
Male, age 72, unknown
129.3
1941
Male, age 53, unknown
115.4
2583
Male, age 75, right hemisphere
113.9
2590
Female, age 75, unknown
103.7
1916
Female, age 42, unknown
98.3
2409
Female, age 72, unknown
89.7
Superior colliculus nTPM: 190.5
2261
Male, age 18, unknown
350.8
2664
Male, age 75, both hemispheres
275.1
1796
Male, age 53, unknown
234.4
1839
Male, age 51, unknown
205.8
2587
Male, age 74, left hemisphere
190.4
1913
Female, age 42, unknown
149.6
2087
Female, age 72, unknown
146.1
1995
Male, age 72, unknown
138.3
1895
Male, age 76, right hemisphere
122.2
2668
Female, age 75, unknown
92.5
Ventral tegmental area nTPM: 178.6
1942
Male, age 51, unknown
219.0
2021
Male, age 53, unknown
212.2
2223
Female, age 72, unknown
186.1
2218
Male, age 76, both hemispheres
183.2
1915
Female, age 42, unknown
163.6
2410
Female, age 72, unknown
107.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
99.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 99.0
Samples: 139
Max nTPM: 236.6
Min nTPM: 31.9
Std nTPM: 40.6
Median nTPM: 91.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
236.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
221.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
213.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
213.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
190.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
177.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
175.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
171.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
167.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
166.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
161.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
159.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
159.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
158.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
155.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
155.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
150.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
148.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
146.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
142.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
137.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
136.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
136.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
136.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
133.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
132.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
131.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
131.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
128.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
127.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
124.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
124.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
123.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
123.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
122.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
120.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
119.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
117.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
115.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
115.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
114.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
114.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
113.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
112.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
112.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
111.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
111.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
109.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
109.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
108.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
107.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
106.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
105.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
103.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
102.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
101.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
101.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
100.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
100.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
99.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
99.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
98.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
97.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
97.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
95.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
94.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
94.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
92.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
91.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
91.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
91.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
90.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
90.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
90.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
89.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
89.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
88.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
88.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
86.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
86.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
86.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
84.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
84.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
83.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
83.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
83.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
82.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
81.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
81.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
80.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
79.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
79.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
79.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
76.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
76.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
76.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
75.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
75.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
71.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
70.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
70.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
69.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
69.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
69.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
68.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
67.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
67.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
67.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
65.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
65.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
65.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
63.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
63.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
62.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
61.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
58.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
58.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
56.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
56.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
54.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
54.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
53.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
52.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
52.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
51.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
51.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
51.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
49.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
49.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
49.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
48.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
48.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
45.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
44.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
42.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
41.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
37.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
37.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
31.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
113.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 113.3
Samples: 4
Max nTPM: 121.9
Min nTPM: 103.1
Sample A
Male
114.2
Sample B
Male
114.1
Sample C
Female
103.1
Sample D
Female
121.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.