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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
39.0
nTPM
HPA Brain:
77.2
nTPM
GTEx:
39.0
nTPM
FANTOM5:
75.6
Scaled Tags Per Million
Pig:
27.4
nTPM
Mouse:
25.9
nTPM
Allen mouse:
1.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
77.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 75.9
2666
Male, age 74, left hemisphere
92.8
2586
Male, age 75, left hemisphere
87.9
1830
Male, age 51, unknown
79.0
2828
Female, age 72, unknown
76.7
1870
Female, age 42, unknown
75.0
2019
Male, age 18, unknown
73.0
2411
Female, age 72, unknown
72.7
1833
Male, age 53, unknown
72.2
1827
Male, age 72, unknown
66.0
2219
Male, age 76, both hemispheres
63.3
Dorsal raphe nucleus nTPM: 68.7
2016
Female, age 72, unknown
73.5
1828
Male, age 53, unknown
72.0
2750
Male, age 76, both hemispheres
69.9
2047
Male, age 72, unknown
69.8
2298
Female, age 72, unknown
58.5
Inferior colliculus nTPM: 65.2
2849
Male, age 72, unknown
70.9
1890
Male, age 53, unknown
66.6
1848
Female, age 42, unknown
65.5
2097
Female, age 72, unknown
57.7
Median raphe nucleus nTPM: 61.8
2220
Male, age 76, midline
61.8
Periaquaductal grey, anterior nTPM: 65.3
1947
Male, age 18, unknown
70.2
1795
Male, age 51, unknown
65.0
2502
Female, age 75, unknown
60.8
Periaquaductal grey, dorsal nTPM: 64.8
2464
Female, age 72, unknown
68.9
1831
Male, age 72, unknown
68.0
2850
Male, age 76, both hemispheres
62.0
1840
Male, age 53, unknown
60.4
Periaquaductal grey, lateral nTPM: 66.8
2053
Male, age 18, unknown
68.9
2272
Male, age 74, both hemispheres
66.4
2140
Male, age 76, both hemispheres
65.0
Pretectal area nTPM: 68.0
2407
Male, age 75, both hemispheres
83.4
1817
Female, age 42, unknown
75.2
2316
Male, age 76, right hemisphere
71.9
2825
Male, age 18, unknown
71.6
1815
Male, age 53, unknown
71.1
2667
Female, age 75, unknown
64.6
2007
Male, age 72, unknown
63.8
2273
Male, age 74, both hemispheres
62.6
1816
Male, age 51, unknown
61.8
2224
Female, age 72, unknown
61.4
1944
Female, age 72, unknown
61.3
Red nucleus nTPM: 77.2
1865
Male, age 51, unknown
86.8
2584
Male, age 75, left hemisphere
84.7
2823
Male, age 76, right hemisphere
83.9
1821
Female, age 72, unknown
81.3
2588
Male, age 74, left hemisphere
79.7
1904
Male, age 53, unknown
78.6
2227
Male, age 72, unknown
77.9
2769
Male, age 72, unknown
76.8
2785
Male, age 18, unknown
70.9
2725
Female, age 75, unknown
69.3
1954
Female, age 42, unknown
69.2
2503
Female, age 72, unknown
67.4
Substantia nigra nTPM: 74.9
2583
Male, age 75, right hemisphere
84.8
2409
Female, age 72, unknown
83.5
2590
Female, age 75, unknown
82.6
2699
Male, age 18, unknown
77.6
1851
Male, age 51, unknown
74.6
2241
Male, age 72, unknown
71.0
1889
Female, age 72, unknown
70.8
1941
Male, age 53, unknown
70.2
1916
Female, age 42, unknown
69.9
2665
Male, age 74, both hemispheres
64.4
Superior colliculus nTPM: 70.1
2668
Female, age 75, unknown
78.9
1913
Female, age 42, unknown
78.6
1995
Male, age 72, unknown
75.6
2664
Male, age 75, both hemispheres
70.9
1796
Male, age 53, unknown
69.7
1895
Male, age 76, right hemisphere
69.3
1839
Male, age 51, unknown
66.8
2587
Male, age 74, left hemisphere
66.1
2261
Male, age 18, unknown
64.2
2087
Female, age 72, unknown
61.0
Ventral tegmental area nTPM: 69.6
2410
Female, age 72, unknown
80.1
2021
Male, age 53, unknown
71.8
1915
Female, age 42, unknown
68.2
1942
Male, age 51, unknown
67.5
2223
Female, age 72, unknown
65.6
2218
Male, age 76, both hemispheres
64.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
39.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 39.0
Samples: 139
Max nTPM: 66.2
Min nTPM: 27.2
Std nTPM: 5.7
Median nTPM: 38.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
66.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
58.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
52.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
51.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
50.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
50.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
50.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
48.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
48.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
48.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
47.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
47.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
46.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
46.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
46.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
45.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
45.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
45.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
44.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
44.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
44.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
44.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
44.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
43.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
43.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
43.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
43.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
43.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
42.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
42.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
42.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
42.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
42.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
41.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
41.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
41.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
41.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
41.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
41.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
40.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
40.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
40.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
40.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
40.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
40.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
40.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
40.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
40.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
40.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
39.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
39.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
39.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
39.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
39.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
39.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
39.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
39.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
39.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
39.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
39.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
39.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
39.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
39.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
38.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
38.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
38.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
38.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
38.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
38.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
38.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
38.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
37.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
37.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
37.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
37.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
37.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
37.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
37.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
37.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
37.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
36.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
36.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
36.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
36.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
36.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
36.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
36.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
36.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
36.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
36.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
36.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
35.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
35.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
35.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
35.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
35.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
35.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
35.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
35.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
35.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
35.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
35.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
35.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
34.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
34.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
34.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
34.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
34.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
34.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
34.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
34.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
34.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
34.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
34.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
34.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
33.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
33.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
33.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
33.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
33.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
33.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
33.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
33.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
33.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
33.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
33.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
33.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
33.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
33.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
32.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
32.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
32.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
32.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
32.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
31.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
30.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
28.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
27.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
27.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
25.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 25.9
Samples: 4
Max nTPM: 27.1
Min nTPM: 24.8
Sample A
Male
25.8
Sample B
Male
24.8
Sample C
Female
25.7
Sample D
Female
27.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.