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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
237.6
nTPM
HPA Brain:
167.4
nTPM
GTEx:
237.6
nTPM
FANTOM5:
99.4
Scaled Tags Per Million
Pig:
112.1
nTPM
Mouse:
99.8
nTPM
Allen mouse:
0.0
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
167.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 141.6
2411
Female, age 72, unknown
167.9
2586
Male, age 75, left hemisphere
167.5
1870
Female, age 42, unknown
161.0
2019
Male, age 18, unknown
154.3
1827
Male, age 72, unknown
152.2
1833
Male, age 53, unknown
140.6
1830
Male, age 51, unknown
131.1
2828
Female, age 72, unknown
130.3
2666
Male, age 74, left hemisphere
107.9
2219
Male, age 76, both hemispheres
103.4
Dorsal raphe nucleus nTPM: 167.4
2298
Female, age 72, unknown
188.7
2016
Female, age 72, unknown
175.1
2047
Male, age 72, unknown
164.7
1828
Male, age 53, unknown
163.8
2750
Male, age 76, both hemispheres
144.6
Inferior colliculus nTPM: 156.9
2097
Female, age 72, unknown
179.9
1890
Male, age 53, unknown
159.3
1848
Female, age 42, unknown
152.4
2849
Male, age 72, unknown
135.8
Median raphe nucleus nTPM: 144.0
2220
Male, age 76, midline
144.0
Periaquaductal grey, anterior nTPM: 146.8
2502
Female, age 75, unknown
156.6
1947
Male, age 18, unknown
144.9
1795
Male, age 51, unknown
139.0
Periaquaductal grey, dorsal nTPM: 166.7
1840
Male, age 53, unknown
182.7
2850
Male, age 76, both hemispheres
178.0
1831
Male, age 72, unknown
153.2
2464
Female, age 72, unknown
152.7
Periaquaductal grey, lateral nTPM: 158.9
2053
Male, age 18, unknown
168.0
2272
Male, age 74, both hemispheres
156.0
2140
Male, age 76, both hemispheres
152.9
Pretectal area nTPM: 158.3
2273
Male, age 74, both hemispheres
191.3
1817
Female, age 42, unknown
174.3
2224
Female, age 72, unknown
172.0
1944
Female, age 72, unknown
168.1
2667
Female, age 75, unknown
166.7
1816
Male, age 51, unknown
166.6
2007
Male, age 72, unknown
150.5
1815
Male, age 53, unknown
149.2
2825
Male, age 18, unknown
143.0
2316
Male, age 76, right hemisphere
138.3
2407
Male, age 75, both hemispheres
121.5
Red nucleus nTPM: 140.3
1821
Female, age 72, unknown
195.2
1954
Female, age 42, unknown
150.4
1865
Male, age 51, unknown
146.0
2769
Male, age 72, unknown
145.9
2503
Female, age 72, unknown
145.1
1904
Male, age 53, unknown
144.5
2823
Male, age 76, right hemisphere
140.2
2785
Male, age 18, unknown
137.9
2725
Female, age 75, unknown
136.8
2227
Male, age 72, unknown
134.6
2584
Male, age 75, left hemisphere
105.6
2588
Male, age 74, left hemisphere
101.4
Substantia nigra nTPM: 154.9
2241
Male, age 72, unknown
181.2
1889
Female, age 72, unknown
171.1
2699
Male, age 18, unknown
162.7
2409
Female, age 72, unknown
161.3
1851
Male, age 51, unknown
161.1
1916
Female, age 42, unknown
153.5
2583
Male, age 75, right hemisphere
146.6
2665
Male, age 74, both hemispheres
140.6
1941
Male, age 53, unknown
137.2
2590
Female, age 75, unknown
133.2
Superior colliculus nTPM: 148.2
2664
Male, age 75, both hemispheres
165.8
2668
Female, age 75, unknown
153.2
1913
Female, age 42, unknown
151.6
2587
Male, age 74, left hemisphere
150.3
1995
Male, age 72, unknown
148.9
1796
Male, age 53, unknown
147.5
2087
Female, age 72, unknown
147.0
1895
Male, age 76, right hemisphere
144.6
1839
Male, age 51, unknown
138.6
2261
Male, age 18, unknown
134.1
Ventral tegmental area nTPM: 150.4
2410
Female, age 72, unknown
161.4
1942
Male, age 51, unknown
154.4
2021
Male, age 53, unknown
153.9
2223
Female, age 72, unknown
148.5
1915
Female, age 42, unknown
148.3
2218
Male, age 76, both hemispheres
135.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
237.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 237.6
Samples: 139
Max nTPM: 437.7
Min nTPM: 147.6
Std nTPM: 52.8
Median nTPM: 224.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
437.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
436.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
383.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
375.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
371.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
360.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
343.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
340.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
328.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
314.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
312.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
310.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
310.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
306.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
305.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
303.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
303.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
300.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
297.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
296.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
290.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
288.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
287.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
281.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
281.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
281.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
279.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
269.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
269.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
267.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
266.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
266.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
264.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
264.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
262.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
260.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
260.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
256.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
254.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
253.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
250.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
250.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
249.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
248.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
248.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
245.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
245.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
245.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
244.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
243.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
242.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
242.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
241.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
241.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
239.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
238.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
237.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
237.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
233.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
232.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
231.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
231.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
230.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
230.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
229.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
227.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
225.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
225.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
224.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
224.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
223.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
223.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
223.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
223.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
222.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
221.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
221.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
221.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
220.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
220.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
220.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
219.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
219.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
219.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
217.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
217.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
217.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
216.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
215.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
212.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
212.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
211.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
210.3
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
210.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
209.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
209.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
208.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
207.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
207.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
206.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
206.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
206.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
206.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
205.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
204.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
204.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
201.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
201.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
198.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
197.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
196.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
196.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
194.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
194.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
194.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
193.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
191.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
190.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
188.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
188.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
188.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
188.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
186.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
186.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
183.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
182.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
182.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
182.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
176.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
173.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
171.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
169.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
166.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
165.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
163.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
163.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
157.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
154.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
147.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
99.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 99.8
Samples: 4
Max nTPM: 107.3
Min nTPM: 92.9
Sample A
Male
107.3
Sample B
Male
100.7
Sample C
Female
92.9
Sample D
Female
98.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.