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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
57.3
nTPM
HPA Brain:
224.3
nTPM
GTEx:
57.3
nTPM
FANTOM5:
47.8
Scaled Tags Per Million
Pig:
84.3
nTPM
Mouse:
69.9
nTPM
Allen mouse:
3.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
224.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 199.2
2586
Male, age 75, left hemisphere
289.8
2019
Male, age 18, unknown
242.5
2828
Female, age 72, unknown
219.0
2666
Male, age 74, left hemisphere
202.0
1870
Female, age 42, unknown
185.5
1830
Male, age 51, unknown
184.1
1833
Male, age 53, unknown
178.1
2411
Female, age 72, unknown
177.0
1827
Male, age 72, unknown
166.2
2219
Male, age 76, both hemispheres
147.4
Dorsal raphe nucleus nTPM: 171.4
1828
Male, age 53, unknown
201.5
2750
Male, age 76, both hemispheres
179.0
2016
Female, age 72, unknown
176.5
2047
Male, age 72, unknown
173.5
2298
Female, age 72, unknown
126.4
Inferior colliculus nTPM: 173.3
1848
Female, age 42, unknown
194.2
1890
Male, age 53, unknown
182.2
2849
Male, age 72, unknown
161.0
2097
Female, age 72, unknown
155.8
Median raphe nucleus nTPM: 118.7
2220
Male, age 76, midline
118.7
Periaquaductal grey, anterior nTPM: 149.8
1947
Male, age 18, unknown
154.3
1795
Male, age 51, unknown
152.8
2502
Female, age 75, unknown
142.3
Periaquaductal grey, dorsal nTPM: 125.3
2464
Female, age 72, unknown
157.4
1831
Male, age 72, unknown
119.7
1840
Male, age 53, unknown
118.9
2850
Male, age 76, both hemispheres
105.2
Periaquaductal grey, lateral nTPM: 117.3
2053
Male, age 18, unknown
123.6
2272
Male, age 74, both hemispheres
118.0
2140
Male, age 76, both hemispheres
110.4
Pretectal area nTPM: 156.8
2007
Male, age 72, unknown
209.6
1817
Female, age 42, unknown
205.3
1944
Female, age 72, unknown
173.7
1815
Male, age 53, unknown
171.4
1816
Male, age 51, unknown
164.0
2667
Female, age 75, unknown
151.2
2316
Male, age 76, right hemisphere
147.9
2825
Male, age 18, unknown
138.9
2273
Male, age 74, both hemispheres
123.2
2407
Male, age 75, both hemispheres
121.3
2224
Female, age 72, unknown
118.3
Red nucleus nTPM: 224.3
2588
Male, age 74, left hemisphere
248.7
2769
Male, age 72, unknown
248.3
1821
Female, age 72, unknown
243.6
2227
Male, age 72, unknown
241.7
2823
Male, age 76, right hemisphere
238.8
2503
Female, age 72, unknown
236.4
2785
Male, age 18, unknown
235.2
1954
Female, age 42, unknown
234.1
1904
Male, age 53, unknown
209.8
1865
Male, age 51, unknown
208.9
2725
Female, age 75, unknown
175.7
2584
Male, age 75, left hemisphere
170.0
Substantia nigra nTPM: 173.2
1916
Female, age 42, unknown
200.6
1941
Male, age 53, unknown
190.2
2583
Male, age 75, right hemisphere
186.9
1889
Female, age 72, unknown
186.3
2665
Male, age 74, both hemispheres
181.1
1851
Male, age 51, unknown
179.5
2699
Male, age 18, unknown
163.5
2590
Female, age 75, unknown
156.1
2409
Female, age 72, unknown
149.7
2241
Male, age 72, unknown
137.7
Superior colliculus nTPM: 171.6
2668
Female, age 75, unknown
253.4
2664
Male, age 75, both hemispheres
181.1
1895
Male, age 76, right hemisphere
176.8
1839
Male, age 51, unknown
175.4
1913
Female, age 42, unknown
163.9
1995
Male, age 72, unknown
163.7
2587
Male, age 74, left hemisphere
160.5
2087
Female, age 72, unknown
155.8
1796
Male, age 53, unknown
146.4
2261
Male, age 18, unknown
138.8
Ventral tegmental area nTPM: 163.8
2410
Female, age 72, unknown
188.0
2223
Female, age 72, unknown
184.1
1915
Female, age 42, unknown
159.0
1942
Male, age 51, unknown
157.2
2021
Male, age 53, unknown
148.2
2218
Male, age 76, both hemispheres
146.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
57.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 57.3
Samples: 139
Max nTPM: 109.4
Min nTPM: 26.7
Std nTPM: 13.3
Median nTPM: 54.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
109.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
90.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
88.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
86.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
86.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
85.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
84.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
82.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
81.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
81.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
77.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
77.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
75.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
74.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
74.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
74.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
73.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
73.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
73.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
71.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
70.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
70.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
69.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
69.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
69.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
69.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
68.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
68.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
67.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
66.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
66.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
66.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
64.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
64.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
64.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
64.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
63.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
63.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
63.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
63.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
63.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
62.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
62.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
62.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
61.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
61.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
60.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
60.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
60.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
60.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
59.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
59.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
58.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
58.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
58.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
58.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
57.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
57.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
57.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
57.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
57.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
57.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
57.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
57.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
56.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
56.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
55.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
55.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
55.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
54.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
54.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
54.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
54.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
53.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
53.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
53.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
53.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
52.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
52.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
52.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
52.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
52.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
52.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
52.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
52.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
52.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
52.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
51.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
51.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
51.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
51.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
51.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
51.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
51.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
50.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
50.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
50.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
50.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
49.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
49.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
49.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
49.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
48.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
48.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
48.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
48.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
47.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
47.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
47.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
46.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
46.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
46.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
45.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
45.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
45.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
45.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
45.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
45.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
45.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
45.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
44.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
43.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
43.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
43.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
43.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
43.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
43.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
42.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
42.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
41.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
40.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
40.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
38.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
37.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
35.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
34.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
30.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
26.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
26.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
69.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 69.9
Samples: 4
Max nTPM: 72.0
Min nTPM: 68.5
Sample A
Male
70.1
Sample B
Male
69.1
Sample C
Female
72.0
Sample D
Female
68.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.