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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
70.6
nTPM
HPA Brain:
118.7
nTPM
GTEx:
70.6
nTPM
FANTOM5:
273.9
Scaled Tags Per Million
Pig:
146.2
nTPM
Mouse:
57.4
nTPM
Allen mouse:
1.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
118.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 93.8
2828
Female, age 72, unknown
116.1
1870
Female, age 42, unknown
104.5
1827
Male, age 72, unknown
99.4
2586
Male, age 75, left hemisphere
99.3
1833
Male, age 53, unknown
92.1
1830
Male, age 51, unknown
90.8
2019
Male, age 18, unknown
90.0
2411
Female, age 72, unknown
84.8
2666
Male, age 74, left hemisphere
81.7
2219
Male, age 76, both hemispheres
79.4
Dorsal raphe nucleus nTPM: 108.6
2016
Female, age 72, unknown
148.3
2298
Female, age 72, unknown
111.2
1828
Male, age 53, unknown
106.8
2047
Male, age 72, unknown
90.7
2750
Male, age 76, both hemispheres
85.9
Inferior colliculus nTPM: 103.4
2097
Female, age 72, unknown
110.7
1848
Female, age 42, unknown
106.4
2849
Male, age 72, unknown
101.5
1890
Male, age 53, unknown
94.9
Median raphe nucleus nTPM: 75.2
2220
Male, age 76, midline
75.2
Periaquaductal grey, anterior nTPM: 101.6
1795
Male, age 51, unknown
104.2
1947
Male, age 18, unknown
101.7
2502
Female, age 75, unknown
98.9
Periaquaductal grey, dorsal nTPM: 118.7
2850
Male, age 76, both hemispheres
130.8
1840
Male, age 53, unknown
123.8
1831
Male, age 72, unknown
116.0
2464
Female, age 72, unknown
104.3
Periaquaductal grey, lateral nTPM: 108.3
2053
Male, age 18, unknown
118.4
2140
Male, age 76, both hemispheres
117.0
2272
Male, age 74, both hemispheres
89.4
Pretectal area nTPM: 106.1
2273
Male, age 74, both hemispheres
133.8
1815
Male, age 53, unknown
114.0
2407
Male, age 75, both hemispheres
111.6
2224
Female, age 72, unknown
110.4
2316
Male, age 76, right hemisphere
108.8
1944
Female, age 72, unknown
106.9
1816
Male, age 51, unknown
100.5
1817
Female, age 42, unknown
99.1
2825
Male, age 18, unknown
98.9
2667
Female, age 75, unknown
98.2
2007
Male, age 72, unknown
85.0
Red nucleus nTPM: 92.8
2503
Female, age 72, unknown
109.1
1904
Male, age 53, unknown
106.4
1954
Female, age 42, unknown
101.9
1821
Female, age 72, unknown
101.5
1865
Male, age 51, unknown
97.4
2769
Male, age 72, unknown
95.7
2227
Male, age 72, unknown
94.1
2823
Male, age 76, right hemisphere
93.6
2785
Male, age 18, unknown
89.4
2725
Female, age 75, unknown
86.5
2588
Male, age 74, left hemisphere
74.1
2584
Male, age 75, left hemisphere
64.4
Substantia nigra nTPM: 98.8
2699
Male, age 18, unknown
121.6
2409
Female, age 72, unknown
114.2
2590
Female, age 75, unknown
108.6
1889
Female, age 72, unknown
103.6
2583
Male, age 75, right hemisphere
99.6
1851
Male, age 51, unknown
97.8
2241
Male, age 72, unknown
93.4
2665
Male, age 74, both hemispheres
90.4
1941
Male, age 53, unknown
83.2
1916
Female, age 42, unknown
76.1
Superior colliculus nTPM: 115.9
1995
Male, age 72, unknown
159.7
1913
Female, age 42, unknown
135.7
2664
Male, age 75, both hemispheres
125.4
2668
Female, age 75, unknown
120.9
2587
Male, age 74, left hemisphere
116.9
2087
Female, age 72, unknown
108.5
1839
Male, age 51, unknown
106.3
1796
Male, age 53, unknown
98.8
2261
Male, age 18, unknown
94.8
1895
Male, age 76, right hemisphere
92.1
Ventral tegmental area nTPM: 96.3
2021
Male, age 53, unknown
109.5
1942
Male, age 51, unknown
102.4
1915
Female, age 42, unknown
98.0
2223
Female, age 72, unknown
96.4
2410
Female, age 72, unknown
92.7
2218
Male, age 76, both hemispheres
79.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
70.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 70.6
Samples: 139
Max nTPM: 150.1
Min nTPM: 26.1
Std nTPM: 25.9
Median nTPM: 67.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
150.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
140.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
139.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
125.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
125.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
123.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
121.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
120.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
115.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
113.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
113.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
110.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
108.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
106.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
105.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
103.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
101.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
97.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
96.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
96.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
95.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
94.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
94.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
93.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
93.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
93.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
92.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
92.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
91.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
90.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
90.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
89.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
88.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
88.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
87.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
87.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
87.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
87.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
86.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
85.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
84.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
83.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
83.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
83.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
83.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
81.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
80.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
78.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
78.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
78.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
77.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
77.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
77.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
76.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
76.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
76.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
75.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
74.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
74.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
73.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
73.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
71.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
71.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
71.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
69.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
69.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
69.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
69.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
68.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
67.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
67.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
64.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
64.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
64.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
64.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
63.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
62.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
61.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
61.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
61.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
61.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
61.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
61.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
60.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
60.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
60.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
60.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
60.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
59.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
58.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
57.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
57.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
55.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
55.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
55.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
54.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
54.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
54.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
53.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
53.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
53.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
52.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
51.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
51.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
49.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
49.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
48.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
48.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
48.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
48.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
46.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
46.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
46.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
46.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
45.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
44.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
44.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
44.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
43.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
42.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
42.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
41.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
41.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
39.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
38.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
36.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
36.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
36.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
35.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
34.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
34.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
34.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
34.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
33.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
32.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
32.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
29.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
28.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
26.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
57.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 57.4
Samples: 4
Max nTPM: 60.8
Min nTPM: 53.4
Sample A
Male
60.8
Sample B
Male
58.2
Sample C
Female
57.2
Sample D
Female
53.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.