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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
712.8
nTPM
HPA Brain:
933.0
nTPM
GTEx:
712.8
nTPM
FANTOM5:
852.1
Scaled Tags Per Million
Pig:
478.7
nTPM
Mouse:
2967.0
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
933.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 750.8
2019
Male, age 18, unknown
947.9
2411
Female, age 72, unknown
833.3
1870
Female, age 42, unknown
827.3
1827
Male, age 72, unknown
790.0
2828
Female, age 72, unknown
760.1
1833
Male, age 53, unknown
724.4
2219
Male, age 76, both hemispheres
690.3
1830
Male, age 51, unknown
687.2
2586
Male, age 75, left hemisphere
663.7
2666
Male, age 74, left hemisphere
584.0
Dorsal raphe nucleus nTPM: 859.5
2298
Female, age 72, unknown
1050.2
2016
Female, age 72, unknown
910.8
1828
Male, age 53, unknown
867.6
2047
Male, age 72, unknown
820.0
2750
Male, age 76, both hemispheres
648.9
Inferior colliculus nTPM: 778.4
2097
Female, age 72, unknown
909.2
1848
Female, age 42, unknown
796.6
1890
Male, age 53, unknown
751.7
2849
Male, age 72, unknown
656.0
Median raphe nucleus nTPM: 812.6
2220
Male, age 76, midline
812.6
Periaquaductal grey, anterior nTPM: 801.7
1795
Male, age 51, unknown
856.6
1947
Male, age 18, unknown
806.0
2502
Female, age 75, unknown
742.5
Periaquaductal grey, dorsal nTPM: 798.3
2850
Male, age 76, both hemispheres
963.9
1840
Male, age 53, unknown
841.2
1831
Male, age 72, unknown
732.0
2464
Female, age 72, unknown
656.2
Periaquaductal grey, lateral nTPM: 933.0
2272
Male, age 74, both hemispheres
1044.4
2140
Male, age 76, both hemispheres
995.7
2053
Male, age 18, unknown
758.8
Pretectal area nTPM: 872.8
2273
Male, age 74, both hemispheres
1096.4
1817
Female, age 42, unknown
975.3
1944
Female, age 72, unknown
971.8
2007
Male, age 72, unknown
955.1
2224
Female, age 72, unknown
897.5
1816
Male, age 51, unknown
883.9
2667
Female, age 75, unknown
829.1
2407
Male, age 75, both hemispheres
815.4
1815
Male, age 53, unknown
807.8
2825
Male, age 18, unknown
688.2
2316
Male, age 76, right hemisphere
680.8
Red nucleus nTPM: 787.9
1821
Female, age 72, unknown
929.7
2785
Male, age 18, unknown
929.3
2503
Female, age 72, unknown
853.1
1865
Male, age 51, unknown
834.2
1954
Female, age 42, unknown
830.4
2769
Male, age 72, unknown
814.3
2227
Male, age 72, unknown
799.4
1904
Male, age 53, unknown
794.3
2725
Female, age 75, unknown
724.9
2823
Male, age 76, right hemisphere
709.9
2588
Male, age 74, left hemisphere
632.4
2584
Male, age 75, left hemisphere
603.4
Substantia nigra nTPM: 847.0
1916
Female, age 42, unknown
1095.4
2590
Female, age 75, unknown
907.0
1889
Female, age 72, unknown
903.8
2409
Female, age 72, unknown
894.0
1851
Male, age 51, unknown
887.6
2241
Male, age 72, unknown
871.2
1941
Male, age 53, unknown
824.0
2699
Male, age 18, unknown
761.1
2583
Male, age 75, right hemisphere
689.7
2665
Male, age 74, both hemispheres
636.0
Superior colliculus nTPM: 769.9
1796
Male, age 53, unknown
868.8
2587
Male, age 74, left hemisphere
859.6
2668
Female, age 75, unknown
854.6
2261
Male, age 18, unknown
843.4
2087
Female, age 72, unknown
819.5
1995
Male, age 72, unknown
774.0
1913
Female, age 42, unknown
756.9
1839
Male, age 51, unknown
694.8
2664
Male, age 75, both hemispheres
651.1
1895
Male, age 76, right hemisphere
576.3
Ventral tegmental area nTPM: 805.2
2410
Female, age 72, unknown
934.6
1915
Female, age 42, unknown
898.4
1942
Male, age 51, unknown
770.8
2223
Female, age 72, unknown
770.0
2021
Male, age 53, unknown
732.5
2218
Male, age 76, both hemispheres
724.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
712.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 712.8
Samples: 139
Max nTPM: 2128.0
Min nTPM: 388.7
Std nTPM: 263.3
Median nTPM: 656.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
2128.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
1963.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
1623.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
1564.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
1466.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
1281.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
1236.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1223.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
1101.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
1080.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1061.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
971.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
947.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
943.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
929.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
928.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
923.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
895.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
890.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
869.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
866.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
840.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
839.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
818.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
818.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
814.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
814.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
813.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
810.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
808.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
797.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
795.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
791.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
773.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
773.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
764.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
759.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
755.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
751.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
749.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
746.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
741.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
740.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
738.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
737.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
734.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
731.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
730.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
728.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
728.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
724.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
715.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
713.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
704.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
700.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
697.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
696.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
695.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
692.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
692.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
692.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
685.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
685.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
685.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
678.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
675.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
674.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
660.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
659.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
656.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
647.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
641.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
640.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
640.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
639.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
639.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
627.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
627.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
625.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
621.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
617.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
610.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
604.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
604.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
603.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
600.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
595.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
593.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
591.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
585.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
585.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
583.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
580.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
580.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
580.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
580.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
575.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
571.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
571.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
570.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
567.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
566.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
557.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
552.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
552.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
548.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
543.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
542.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
541.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
541.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
540.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
540.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
536.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
534.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
532.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
528.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
528.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
525.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
522.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
520.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
519.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
516.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
514.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
512.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
511.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
510.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
501.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
498.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
498.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
493.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
488.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
458.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
450.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
444.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
435.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
434.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
411.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
394.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
388.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.