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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
758.1
nTPM
Monaco:
1993.4
nTPM
Schmiedel:
807.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
758.1
HPA sample
nTPM
gdT-cell nTPM: 560.3
Samples: 6
Max nTPM: 688.0
Min nTPM: 422.7
P10809_1007
422.7
P10809_1022
688.0
P10809_1041
630.1
P10809_1060
513.3
P10809_1077
594.4
P10809_1098
513.1
MAIT T-cell nTPM: 501.0
Samples: 6
Max nTPM: 603.8
Min nTPM: 406.2
P10809_1006
406.2
P10809_1024
554.7
P10809_1043
603.8
P10809_1062
529.1
P10809_1083
436.0
P10809_1097
475.9
Memory CD4 T-cell nTPM: 621.7
Samples: 6
Max nTPM: 715.4
Min nTPM: 530.5
P10809_1014
581.2
P10809_1026
666.5
P10809_1045
715.4
P10809_1064
565.1
P10809_1086
530.5
P10809_1113
671.7
Memory CD8 T-cell nTPM: 544.7
Samples: 5
Max nTPM: 611.1
Min nTPM: 499.7
P10809_1012
536.5
P10809_1027
566.1
P10809_1046
611.1
P10809_1065
499.7
P10809_1111
510.0
Naive CD4 T-cell nTPM: 322.6
Samples: 6
Max nTPM: 371.2
Min nTPM: 276.7
P10809_1015
276.7
P10809_1030
327.9
P10809_1049
317.4
P10809_1068
371.2
P10809_1085
336.8
P10809_1112
305.3
Naive CD8 T-cell nTPM: 361.3
Samples: 6
Max nTPM: 451.3
Min nTPM: 309.7
P10809_1016
320.0
P10809_1031
314.1
P10809_1050
381.7
P10809_1069
391.2
P10809_1087
451.3
P10809_1110
309.7
T-reg nTPM: 758.1
Samples: 6
Max nTPM: 849.6
Min nTPM: 721.1
P10809_1018
749.9
P10809_1037
734.7
P10809_1056
849.6
P10809_1075
721.1
P10809_1094
743.2
P10809_1106
750.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1993.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1263.8
Samples: 4
Max nTPM: 1702.7
Min nTPM: 723.0
RHH5202_R3573
1349.1
RHH5230_R3602
1280.5
RHH5259_R3631
723.0
RHH5288_R3660
1702.7
Effector memory CD8 T-cell nTPM: 1249.9
Samples: 4
Max nTPM: 1491.6
Min nTPM: 814.9
RHH5203_R3574
1491.6
RHH5231_R3603
1419.3
RHH5260_R3632
814.9
RHH5289_R3661
1273.9
MAIT T-cell nTPM: 965.6
Samples: 4
Max nTPM: 1199.0
Min nTPM: 679.7
RHH5233_R3605
1199.0
RHH5205_R3576
679.7
RHH5262_R3634
932.3
RHH5297_R3663
1051.3
Memory CD4 T-cell TFH nTPM: 1368.1
Samples: 4
Max nTPM: 1712.3
Min nTPM: 1175.4
RHH5300_R3666
1712.3
RHH5236_R3608
1251.3
RHH5265_R3637
1175.4
RHH5208_R3579
1333.4
Memory CD4 T-cell Th1 nTPM: 1210.0
Samples: 4
Max nTPM: 1851.4
Min nTPM: 870.3
RHH5210_R3581
1060.9
RHH5302_R3668
1851.4
RHH5238_R3610
870.3
RHH5267_R3639
1057.3
Memory CD4 T-cell Th1/Th17 nTPM: 1358.6
Samples: 4
Max nTPM: 1946.4
Min nTPM: 722.7
RHH5303_R3669
1946.4
RHH5211_R3582
1657.9
RHH5239_R3611
722.7
RHH5268_R3640
1107.4
Memory CD4 T-cell Th17 nTPM: 1218.7
Samples: 4
Max nTPM: 1525.2
Min nTPM: 1007.5
RHH5304_R3670
1525.2
RHH5212_R3583
1328.9
RHH5240_R3612
1007.5
RHH5269_R3641
1013.2
Memory CD4 T-cell Th2 nTPM: 1993.4
Samples: 4
Max nTPM: 2268.5
Min nTPM: 1741.0
RHH5305_R3671
2268.5
RHH5213_R3584
1741.0
RHH5241_R3613
2187.1
RHH5270_R3642
1776.9
Naive CD4 T-cell nTPM: 772.9
Samples: 4
Max nTPM: 910.9
Min nTPM: 641.1
RHH5306_R3672
910.9
RHH5214_R3585
750.8
RHH5242_R3614
788.6
RHH5271_R3643
641.1
Naive CD8 T-cell nTPM: 602.0
Samples: 4
Max nTPM: 706.7
Min nTPM: 352.3
RHH5201_R3572
679.0
RHH5229_R3601
352.3
RHH5258_R3630
706.7
RHH5287_R3659
670.1
Non-Vd2 gdTCR nTPM: 1278.6
Samples: 4
Max nTPM: 1535.5
Min nTPM: 1004.6
RHH5235_R3607
1004.6
RHH5264_R3636
1283.5
RHH5207_R3578
1290.7
RHH5299_R3665
1535.5
T-reg nTPM: 1150.3
Samples: 4
Max nTPM: 1550.9
Min nTPM: 817.2
RHH5301_R3667
1550.9
RHH5237_R3609
1286.4
RHH5266_R3638
946.7
RHH5209_R3580
817.2
Terminal effector memory CD4 T-cell nTPM: 1250.6
Samples: 2
Max nTPM: 1418.8
Min nTPM: 1082.4
RHH5243_R3615
1082.4
RHH5272_R3644
1418.8
Terminal effector memory CD8 T-cell nTPM: 1282.4
Samples: 4
Max nTPM: 1619.7
Min nTPM: 934.7
RHH5232_R3604
1619.7
RHH5204_R3575
1233.1
RHH5261_R3633
934.7
RHH5296_R3662
1342.1
Vd2 gdTCR nTPM: 1374.4
Samples: 4
Max nTPM: 1664.7
Min nTPM: 980.4
RHH5234_R3606
1664.7
RHH5206_R3577
1425.8
RHH5263_R3635
980.4
RHH5298_R3664
1426.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.