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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1350.9
nTPM
Monaco:
171.0
nTPM
Schmiedel:
287.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1350.9
HPA sample
nTPM
gdT-cell nTPM: 715.7
Samples: 6
Max nTPM: 1002.7
Min nTPM: 416.2
P10809_1007
416.2
P10809_1022
742.0
P10809_1041
1002.7
P10809_1060
605.6
P10809_1077
880.5
P10809_1098
647.4
MAIT T-cell nTPM: 941.8
Samples: 6
Max nTPM: 1064.4
Min nTPM: 472.5
P10809_1006
472.5
P10809_1024
999.9
P10809_1043
1046.4
P10809_1062
1064.4
P10809_1083
1006.4
P10809_1097
1061.0
Memory CD4 T-cell nTPM: 1350.9
Samples: 6
Max nTPM: 1669.6
Min nTPM: 774.3
P10809_1014
774.3
P10809_1026
1669.6
P10809_1045
1407.6
P10809_1064
1400.5
P10809_1086
1463.1
P10809_1113
1390.5
Memory CD8 T-cell nTPM: 845.5
Samples: 5
Max nTPM: 1029.4
Min nTPM: 501.0
P10809_1012
501.0
P10809_1027
1029.4
P10809_1046
922.1
P10809_1065
937.9
P10809_1111
837.3
Naive CD4 T-cell nTPM: 392.8
Samples: 6
Max nTPM: 581.9
Min nTPM: 193.7
P10809_1015
193.7
P10809_1030
455.7
P10809_1049
425.5
P10809_1068
342.3
P10809_1085
581.9
P10809_1112
357.4
Naive CD8 T-cell nTPM: 438.6
Samples: 6
Max nTPM: 835.8
Min nTPM: 98.3
P10809_1016
98.3
P10809_1031
482.2
P10809_1050
383.0
P10809_1069
571.9
P10809_1087
835.8
P10809_1110
260.3
T-reg nTPM: 1273.8
Samples: 6
Max nTPM: 1992.0
Min nTPM: 696.4
P10809_1018
696.4
P10809_1037
1262.6
P10809_1056
1992.0
P10809_1075
1238.7
P10809_1094
1128.8
P10809_1106
1324.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 123.7
Min nTPM: 42.4
RHH5202_R3573
42.4
RHH5230_R3602
70.9
RHH5259_R3631
123.7
RHH5288_R3660
68.5
Effector memory CD8 T-cell nTPM: 70.9
Samples: 4
Max nTPM: 108.3
Min nTPM: 51.2
RHH5203_R3574
63.1
RHH5231_R3603
60.8
RHH5260_R3632
108.3
RHH5289_R3661
51.2
MAIT T-cell nTPM: 77.1
Samples: 4
Max nTPM: 109.2
Min nTPM: 43.0
RHH5233_R3605
43.0
RHH5205_R3576
90.5
RHH5262_R3634
109.2
RHH5297_R3663
65.7
Memory CD4 T-cell TFH nTPM: 90.5
Samples: 4
Max nTPM: 105.4
Min nTPM: 60.0
RHH5300_R3666
94.9
RHH5236_R3608
105.4
RHH5265_R3637
101.8
RHH5208_R3579
60.0
Memory CD4 T-cell Th1 nTPM: 137.6
Samples: 4
Max nTPM: 224.6
Min nTPM: 38.4
RHH5210_R3581
38.4
RHH5302_R3668
116.5
RHH5238_R3610
224.6
RHH5267_R3639
171.0
Memory CD4 T-cell Th1/Th17 nTPM: 156.9
Samples: 4
Max nTPM: 222.7
Min nTPM: 102.9
RHH5303_R3669
140.1
RHH5211_R3582
102.9
RHH5239_R3611
161.7
RHH5268_R3640
222.7
Memory CD4 T-cell Th17 nTPM: 171.0
Samples: 4
Max nTPM: 203.9
Min nTPM: 118.9
RHH5304_R3670
180.4
RHH5212_R3583
118.9
RHH5240_R3612
180.8
RHH5269_R3641
203.9
Memory CD4 T-cell Th2 nTPM: 161.7
Samples: 4
Max nTPM: 214.9
Min nTPM: 98.8
RHH5305_R3671
214.9
RHH5213_R3584
142.6
RHH5241_R3613
98.8
RHH5270_R3642
190.5
Naive CD4 T-cell nTPM: 35.0
Samples: 4
Max nTPM: 53.4
Min nTPM: 26.7
RHH5306_R3672
26.9
RHH5214_R3585
53.4
RHH5242_R3614
26.7
RHH5271_R3643
33.0
Naive CD8 T-cell nTPM: 6.4
Samples: 4
Max nTPM: 12.7
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
7.6
RHH5258_R3630
5.4
RHH5287_R3659
12.7
Non-Vd2 gdTCR nTPM: 67.3
Samples: 4
Max nTPM: 78.7
Min nTPM: 43.1
RHH5235_R3607
78.7
RHH5264_R3636
71.1
RHH5207_R3578
43.1
RHH5299_R3665
76.1
T-reg nTPM: 86.6
Samples: 4
Max nTPM: 114.1
Min nTPM: 69.5
RHH5301_R3667
91.1
RHH5237_R3609
69.5
RHH5266_R3638
114.1
RHH5209_R3580
71.7
Terminal effector memory CD4 T-cell nTPM: 102.8
Samples: 2
Max nTPM: 131.2
Min nTPM: 74.4
RHH5243_R3615
131.2
RHH5272_R3644
74.4
Terminal effector memory CD8 T-cell nTPM: 106.5
Samples: 4
Max nTPM: 156.3
Min nTPM: 43.0
RHH5232_R3604
43.0
RHH5204_R3575
155.3
RHH5261_R3633
156.3
RHH5296_R3662
71.2
Vd2 gdTCR nTPM: 117.4
Samples: 4
Max nTPM: 210.7
Min nTPM: 58.5
RHH5234_R3606
58.5
RHH5206_R3577
210.7
RHH5263_R3635
114.2
RHH5298_R3664
86.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.