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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
147.3
nTPM
HPA Brain:
109.6
nTPM
GTEx:
147.3
nTPM
FANTOM5:
232.8
Scaled Tags Per Million
Pig:
115.9
nTPM
Mouse:
139.9
nTPM
Allen mouse:
3.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
109.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 63.8
1870
Female, age 42, unknown
88.7
1833
Male, age 53, unknown
73.6
2411
Female, age 72, unknown
73.3
1830
Male, age 51, unknown
66.9
2219
Male, age 76, both hemispheres
61.1
2828
Female, age 72, unknown
60.5
2586
Male, age 75, left hemisphere
60.0
2019
Male, age 18, unknown
58.2
1827
Male, age 72, unknown
56.9
2666
Male, age 74, left hemisphere
39.1
Dorsal raphe nucleus nTPM: 76.6
2298
Female, age 72, unknown
86.3
2750
Male, age 76, both hemispheres
78.0
2047
Male, age 72, unknown
77.7
2016
Female, age 72, unknown
71.3
1828
Male, age 53, unknown
70.0
Inferior colliculus nTPM: 60.0
2097
Female, age 72, unknown
67.1
1890
Male, age 53, unknown
59.6
2849
Male, age 72, unknown
57.7
1848
Female, age 42, unknown
55.5
Median raphe nucleus nTPM: 109.6
2220
Male, age 76, midline
109.6
Periaquaductal grey, anterior nTPM: 59.1
1947
Male, age 18, unknown
62.4
1795
Male, age 51, unknown
58.3
2502
Female, age 75, unknown
56.6
Periaquaductal grey, dorsal nTPM: 66.2
2850
Male, age 76, both hemispheres
91.2
1840
Male, age 53, unknown
63.3
2464
Female, age 72, unknown
55.3
1831
Male, age 72, unknown
54.8
Periaquaductal grey, lateral nTPM: 68.6
2140
Male, age 76, both hemispheres
69.9
2272
Male, age 74, both hemispheres
68.5
2053
Male, age 18, unknown
67.4
Pretectal area nTPM: 67.8
2273
Male, age 74, both hemispheres
90.9
2667
Female, age 75, unknown
82.7
2224
Female, age 72, unknown
78.4
1944
Female, age 72, unknown
70.0
1815
Male, age 53, unknown
67.5
2825
Male, age 18, unknown
63.9
1816
Male, age 51, unknown
62.8
1817
Female, age 42, unknown
62.3
2316
Male, age 76, right hemisphere
57.8
2407
Male, age 75, both hemispheres
57.7
2007
Male, age 72, unknown
52.1
Red nucleus nTPM: 70.9
1821
Female, age 72, unknown
87.0
1904
Male, age 53, unknown
84.8
1954
Female, age 42, unknown
79.6
1865
Male, age 51, unknown
78.4
2725
Female, age 75, unknown
76.4
2503
Female, age 72, unknown
71.5
2823
Male, age 76, right hemisphere
71.4
2227
Male, age 72, unknown
69.6
2769
Male, age 72, unknown
66.7
2785
Male, age 18, unknown
61.9
2584
Male, age 75, left hemisphere
61.4
2588
Male, age 74, left hemisphere
41.6
Substantia nigra nTPM: 85.8
2241
Male, age 72, unknown
132.4
1916
Female, age 42, unknown
116.7
2699
Male, age 18, unknown
97.0
1851
Male, age 51, unknown
95.0
2409
Female, age 72, unknown
90.6
1941
Male, age 53, unknown
80.0
1889
Female, age 72, unknown
79.0
2590
Female, age 75, unknown
67.6
2583
Male, age 75, right hemisphere
54.5
2665
Male, age 74, both hemispheres
45.0
Superior colliculus nTPM: 60.7
2587
Male, age 74, left hemisphere
81.7
1913
Female, age 42, unknown
74.1
1995
Male, age 72, unknown
65.8
2261
Male, age 18, unknown
61.7
2087
Female, age 72, unknown
61.0
1796
Male, age 53, unknown
59.8
2668
Female, age 75, unknown
55.9
2664
Male, age 75, both hemispheres
51.5
1839
Male, age 51, unknown
47.9
1895
Male, age 76, right hemisphere
47.6
Ventral tegmental area nTPM: 85.6
2223
Female, age 72, unknown
94.3
1915
Female, age 42, unknown
90.5
2410
Female, age 72, unknown
90.2
2218
Male, age 76, both hemispheres
88.1
1942
Male, age 51, unknown
82.3
2021
Male, age 53, unknown
68.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
147.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 147.3
Samples: 139
Max nTPM: 311.5
Min nTPM: 70.4
Std nTPM: 47.2
Median nTPM: 138.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
311.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
310.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
286.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
283.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
272.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
264.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
255.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
254.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
251.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
251.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
246.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
211.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
208.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
207.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
199.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
196.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
190.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
188.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
184.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
184.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
183.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
181.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
178.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
177.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
176.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
174.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
173.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
172.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
170.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
170.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
169.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
168.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
168.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
167.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
167.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
167.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
166.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
165.8
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
164.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
164.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
163.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
162.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
162.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
162.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
159.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
159.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
154.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
154.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
154.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
152.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
150.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
149.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
149.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
149.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
148.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
147.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
147.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
146.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
146.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
146.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
145.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
144.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
144.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
144.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
143.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
143.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
142.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
141.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
141.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
138.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
138.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
135.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
135.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
135.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
134.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
133.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
133.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
131.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
131.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
130.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
128.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
127.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
127.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
125.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
125.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
124.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
123.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
123.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
123.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
121.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
121.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
121.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
120.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
119.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
119.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
119.1
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
119.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
118.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
118.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
118.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
117.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
117.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
117.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
115.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
115.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
114.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
114.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
114.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
111.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
111.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
111.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
111.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
110.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
110.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
110.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
109.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
109.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
107.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
106.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
106.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
104.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
103.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
103.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
103.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
102.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
101.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
101.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
99.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
95.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
95.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
94.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
93.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
91.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
87.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
83.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
81.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
79.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
72.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
70.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
139.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 139.9
Samples: 4
Max nTPM: 157.3
Min nTPM: 123.0
Sample A
Male
157.3
Sample B
Male
131.5
Sample C
Female
123.0
Sample D
Female
147.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.