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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
207.4
nTPM
FANTOM5:
283.3
Scaled Tags Per Million
Pig:
93.9
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
207.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 202.9
2301
Female, age 85, both hemispheres
226.4
2188
Female, age 91, both hemispheres
203.5
2090
Male, age 80, both hemispheres
193.9
1984
Male, age 76, both hemispheres
187.9
Dorsal cochlear nucleus nTPM: 172.5
2187
Female, age 91, both hemispheres
187.9
2378
Male, age 80, both hemispheres
180.6
2802
Male, age 74, right hemisphere
167.1
2058
Male, age 76, both hemispheres
163.8
2370
Male, age 61, both hemispheres
162.9
Dorsal tegmental nucleus nTPM: 192.7
2358
Male, age 61, both hemispheres
263.5
2083
Male, age 80, both hemispheres
176.4
2326
Male, age 74, both hemispheres
166.4
1936
Male, age 76, left hemisphere
164.6
Dorsolateral tegmental area nTPM: 176.6
2337
Male, age 61, both hemispheres
238.1
2141
Male, age 76, both hemispheres
186.5
2360
Male, age 74, both hemispheres
159.0
2654
Male, age 80, both hemispheres
155.6
2751
Female, age 85, both hemispheres
143.9
Kolliker-Fuse nucleus nTPM: 207.4
2793
Female, age 91, left hemisphere
252.4
2315
Male, age 76, right hemisphere
188.2
2163
Male, age 80, both hemispheres
181.5
Lateral lemniscal nuclei nTPM: 195.5
2320
Female, age 91, left hemisphere
233.5
2169
Male, age 76, both hemispheres
199.4
2453
Male, age 74, right hemisphere
196.0
2036
Male, age 80, both hemispheres
175.9
2746
Female, age 85, left hemisphere
172.6
Lateral parabrachial nucleus nTPM: 181.8
2792
Male, age 76, both hemispheres
206.7
2139
Female, age 85, right hemisphere
184.1
2013
Male, age 80, both hemispheres
175.8
2790
Male, age 61, both hemispheres
160.5
Lateral vestibular nucleus nTPM: 196.0
2184
Male, age 76, both hemispheres
200.6
2311
Male, age 80, both hemispheres
191.4
Locus coeruleus nTPM: 166.9
2720
Male, age 74, both hemispheres
213.8
2162
Male, age 80, both hemispheres
184.8
2317
Female, age 72, unknown
157.0
1980
Male, age 76, both hemispheres
156.9
2014
Male, age 55, unknown
155.1
2123
Female, age 91, both hemispheres
154.4
2788
Male, age 74, unknown
146.2
Medial parabrachial nucleus nTPM: 185.2
2854
Male, age 80, both hemispheres
214.8
2786
Male, age 76, both hemispheres
193.7
2156
Male, age 61, both hemispheres
193.2
2170
Female, age 91, both hemispheres
172.4
2463
Female, age 85, right hemisphere
152.1
Medial periolivary nuclei nTPM: 187.6
2458
Female, age 91, both hemispheres
243.0
2081
Male, age 80, both hemispheres
210.2
2171
Female, age 85, both hemispheres
195.2
2791
Male, age 74, right hemisphere
145.0
2063
Male, age 76, both hemispheres
144.4
Motor facial nucleus nTPM: 197.8
2697
Female, age 85, both hemispheres
253.4
2327
Male, age 80, both hemispheres
236.0
2795
Female, age 91, both hemispheres
199.3
2365
Male, age 74, right hemisphere
182.8
2126
Male, age 61, both hemispheres
161.9
2062
Male, age 76, both hemispheres
153.5
Motor trigeminal nucleus nTPM: 201.8
2321
Female, age 91, both hemispheres
239.0
2079
Male, age 80, both hemispheres
210.0
2560
Male, age 74, both hemispheres
196.8
2335
Male, age 61, both hemispheres
191.3
2309
Male, age 76, both hemispheres
172.0
Nuclei of the trapezoid body nTPM: 178.8
2166
Male, age 80, both hemispheres
213.7
2368
Female, age 91, both hemispheres
198.4
2159
Male, age 61, both hemispheres
167.3
2735
Female, age 85, both hemispheres
164.4
1983
Male, age 76, both hemispheres
150.2
Nucleus raphe magnus nTPM: 195.3
2172
Female, age 85, both hemispheres
220.3
2328
Male, age 80, both hemispheres
219.7
2459
Female, age 91, both hemispheres
210.6
2455
Male, age 74, both hemispheres
180.2
2051
Male, age 76, both hemispheres
177.4
2160
Male, age 61, both hemispheres
163.3
Paramedian reticular nucleus nTPM: 151.9
2050
Female, age 85, both hemispheres
158.2
2052
Male, age 76, both hemispheres
153.2
2313
Male, age 61, both hemispheres
149.5
2057
Male, age 80, both hemispheres
146.8
Pedunculopontine tegmental nucleus nTPM: 180.4
2338
Male, age 61, both hemispheres
207.5
2334
Male, age 80, both hemispheres
176.4
1921
Female, age 85, both hemispheres
157.5
Pontine nuclei nTPM: 177.7
2115
Male, age 80, left hemisphere
230.0
2319
Female, age 91, both hemispheres
211.9
2787
Female, age 85, both hemispheres
186.4
2454
Male, age 74, left hemisphere
177.7
1968
Male, age 76, left hemisphere
166.7
1863
Male, age 55, unknown
163.5
2109
Female, age 72, unknown
145.6
2727
Male, age 61, right hemisphere
139.9
Pontine raphe nucleus nTPM: 164.6
2122
Female, age 85, midline
172.3
2853
Male, age 76, midline
156.9
Posteroventral cochlear nucleus nTPM: 175.7
2135
Female, age 91, both hemispheres
207.8
2341
Male, age 80, both hemispheres
186.5
2070
Male, age 76, both hemispheres
171.2
2371
Male, age 61, both hemispheres
165.7
2752
Female, age 85, both hemispheres
147.6
Principal sensory trigeminal nucleus nTPM: 194.5
2367
Female, age 91, left hemisphere
229.2
2324
Male, age 76, both hemispheres
212.5
2008
Male, age 80, left hemisphere
170.1
2158
Male, age 61, both hemispheres
166.3
Reticular pontine nucleus, caudal nTPM: 196.1
2332
Male, age 80, right hemisphere
237.2
2457
Female, age 91, both hemispheres
201.7
2092
Male, age 76, both hemispheres
174.5
2559
Male, age 74, both hemispheres
171.1
Reticular pontine nucleus, oral nTPM: 180.5
2366
Female, age 91, both hemispheres
241.4
2167
Male, age 76, both hemispheres
184.1
2012
Female, age 85, both hemispheres
165.4
1939
Male, age 80, both hemispheres
157.6
2361
Male, age 74, both hemispheres
154.1
Reticulotegmental nucleus nTPM: 192.7
2333
Male, age 80, both hemispheres
212.1
2322
Female, age 91, both hemispheres
206.6
2452
Male, age 74, both hemispheres
193.8
2325
Male, age 76, both hemispheres
158.4
Spinal trigeminal nucleus, oral nTPM: 178.1
2164
Male, age 80, both hemispheres
203.7
1978
Male, age 76, both hemispheres
176.4
2737
Female, age 85, both hemispheres
154.1
Subcoeruleus area nTPM: 177.5
2089
Male, age 76, left hemisphere
196.7
2323
Female, age 91, left hemisphere
185.6
2451
Male, age 74, both hemispheres
179.3
1958
Male, age 80, both hemispheres
167.7
2369
Female, age 85, left hemisphere
158.2
Superior olive nTPM: 194.9
2329
Male, age 80, right hemisphere
240.4
2561
Female, age 91, both hemispheres
229.9
1875
Female, age 85, both hemispheres
169.2
2364
Male, age 74, right hemisphere
168.3
2020
Male, age 76, both hemispheres
166.8
Ventral periolivary nuclei nTPM: 195.6
2130
Female, age 85, both hemispheres
231.0
2794
Female, age 91, left hemisphere
200.8
2165
Male, age 80, both hemispheres
194.5
2023
Male, age 76, both hemispheres
156.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 197.4
2456
Female, age 91, both hemispheres
214.1
2840
Female, age 85, both hemispheres
210.2
2161
Male, age 80, both hemispheres
200.1
2449
Male, age 74, both hemispheres
192.2
2359
Male, age 61, both hemispheres
187.0
1959
Male, age 76, both hemispheres
181.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.