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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1686.0
nTPM
Monaco:
669.1
nTPM
Schmiedel:
84.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1686.0
HPA sample
nTPM
gdT-cell nTPM: 605.3
Samples: 6
Max nTPM: 859.6
Min nTPM: 339.0
P10809_1007
339.0
P10809_1022
859.6
P10809_1041
733.3
P10809_1060
477.4
P10809_1077
706.1
P10809_1098
516.6
MAIT T-cell nTPM: 669.9
Samples: 6
Max nTPM: 927.9
Min nTPM: 325.5
P10809_1006
325.5
P10809_1024
927.9
P10809_1043
769.0
P10809_1062
596.6
P10809_1083
661.5
P10809_1097
738.7
Memory CD4 T-cell nTPM: 688.3
Samples: 6
Max nTPM: 904.8
Min nTPM: 413.8
P10809_1014
413.8
P10809_1026
727.4
P10809_1045
904.8
P10809_1064
720.6
P10809_1086
655.0
P10809_1113
708.4
Memory CD8 T-cell nTPM: 702.0
Samples: 5
Max nTPM: 976.7
Min nTPM: 399.1
P10809_1012
399.1
P10809_1027
976.7
P10809_1046
794.6
P10809_1065
600.3
P10809_1111
739.2
Naive CD4 T-cell nTPM: 77.3
Samples: 6
Max nTPM: 210.8
Min nTPM: 32.5
P10809_1015
32.5
P10809_1030
55.6
P10809_1049
64.4
P10809_1068
40.0
P10809_1085
210.8
P10809_1112
60.2
Naive CD8 T-cell nTPM: 314.8
Samples: 6
Max nTPM: 535.3
Min nTPM: 46.9
P10809_1016
46.9
P10809_1031
358.1
P10809_1050
409.9
P10809_1069
387.7
P10809_1087
535.3
P10809_1110
151.0
T-reg nTPM: 1686.0
Samples: 6
Max nTPM: 2157.8
Min nTPM: 1152.8
P10809_1018
1152.8
P10809_1037
2157.8
P10809_1056
2026.4
P10809_1075
1612.1
P10809_1094
1360.6
P10809_1106
1806.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
669.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 252.3
Samples: 4
Max nTPM: 417.5
Min nTPM: 126.7
RHH5202_R3573
281.5
RHH5230_R3602
126.7
RHH5259_R3631
183.4
RHH5288_R3660
417.5
Effector memory CD8 T-cell nTPM: 669.1
Samples: 4
Max nTPM: 869.5
Min nTPM: 389.1
RHH5203_R3574
869.5
RHH5231_R3603
602.8
RHH5260_R3632
389.1
RHH5289_R3661
815.0
MAIT T-cell nTPM: 488.6
Samples: 4
Max nTPM: 590.1
Min nTPM: 379.1
RHH5233_R3605
590.1
RHH5205_R3576
379.1
RHH5262_R3634
477.1
RHH5297_R3663
507.9
Memory CD4 T-cell TFH nTPM: 372.4
Samples: 4
Max nTPM: 476.8
Min nTPM: 270.5
RHH5300_R3666
374.6
RHH5236_R3608
476.8
RHH5265_R3637
367.6
RHH5208_R3579
270.5
Memory CD4 T-cell Th1 nTPM: 356.1
Samples: 4
Max nTPM: 549.6
Min nTPM: 252.6
RHH5210_R3581
252.6
RHH5302_R3668
549.6
RHH5238_R3610
290.3
RHH5267_R3639
331.9
Memory CD4 T-cell Th1/Th17 nTPM: 541.7
Samples: 4
Max nTPM: 809.6
Min nTPM: 204.7
RHH5303_R3669
809.6
RHH5211_R3582
721.2
RHH5239_R3611
204.7
RHH5268_R3640
431.2
Memory CD4 T-cell Th17 nTPM: 583.7
Samples: 4
Max nTPM: 776.2
Min nTPM: 453.5
RHH5304_R3670
584.3
RHH5212_R3583
776.2
RHH5240_R3612
453.5
RHH5269_R3641
520.6
Memory CD4 T-cell Th2 nTPM: 436.5
Samples: 4
Max nTPM: 461.4
Min nTPM: 402.6
RHH5305_R3671
447.1
RHH5213_R3584
461.4
RHH5241_R3613
434.8
RHH5270_R3642
402.6
Naive CD4 T-cell nTPM: 39.0
Samples: 4
Max nTPM: 61.1
Min nTPM: 18.8
RHH5306_R3672
61.1
RHH5214_R3585
52.4
RHH5242_R3614
23.6
RHH5271_R3643
18.8
Naive CD8 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 15.9
Min nTPM: 12.1
RHH5201_R3572
12.1
RHH5229_R3601
12.4
RHH5258_R3630
15.9
RHH5287_R3659
13.3
Non-Vd2 gdTCR nTPM: 625.0
Samples: 4
Max nTPM: 769.0
Min nTPM: 306.3
RHH5235_R3607
306.3
RHH5264_R3636
711.3
RHH5207_R3578
769.0
RHH5299_R3665
713.2
T-reg nTPM: 526.5
Samples: 4
Max nTPM: 790.3
Min nTPM: 370.8
RHH5301_R3667
564.9
RHH5237_R3609
790.3
RHH5266_R3638
370.8
RHH5209_R3580
380.1
Terminal effector memory CD4 T-cell nTPM: 499.7
Samples: 2
Max nTPM: 607.5
Min nTPM: 391.9
RHH5243_R3615
391.9
RHH5272_R3644
607.5
Terminal effector memory CD8 T-cell nTPM: 623.8
Samples: 4
Max nTPM: 731.8
Min nTPM: 471.4
RHH5232_R3604
594.5
RHH5204_R3575
731.8
RHH5261_R3633
471.4
RHH5296_R3662
697.5
Vd2 gdTCR nTPM: 371.6
Samples: 4
Max nTPM: 645.9
Min nTPM: 262.0
RHH5234_R3606
282.9
RHH5206_R3577
645.9
RHH5263_R3635
262.0
RHH5298_R3664
295.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.