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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
216.1
nTPM
HPA Brain:
303.4
nTPM
GTEx:
216.1
nTPM
FANTOM5:
9.6
Scaled Tags Per Million
Pig:
335.6
nTPM
Mouse:
344.3
nTPM
Allen mouse:
15.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
303.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 199.7
2219
Male, age 76, both hemispheres
259.1
2019
Male, age 18, unknown
254.6
2586
Male, age 75, left hemisphere
254.4
1827
Male, age 72, unknown
239.8
2828
Female, age 72, unknown
226.6
2411
Female, age 72, unknown
223.4
1870
Female, age 42, unknown
153.7
2666
Male, age 74, left hemisphere
148.9
1833
Male, age 53, unknown
119.0
1830
Male, age 51, unknown
117.5
Dorsal raphe nucleus nTPM: 245.6
2298
Female, age 72, unknown
376.8
2047
Male, age 72, unknown
264.0
1828
Male, age 53, unknown
234.6
2750
Male, age 76, both hemispheres
229.1
2016
Female, age 72, unknown
123.7
Inferior colliculus nTPM: 119.9
2097
Female, age 72, unknown
158.6
1848
Female, age 42, unknown
115.9
1890
Male, age 53, unknown
105.6
2849
Male, age 72, unknown
99.3
Median raphe nucleus nTPM: 303.4
2220
Male, age 76, midline
303.4
Periaquaductal grey, anterior nTPM: 241.8
1795
Male, age 51, unknown
309.5
1947
Male, age 18, unknown
222.8
2502
Female, age 75, unknown
193.0
Periaquaductal grey, dorsal nTPM: 143.3
2850
Male, age 76, both hemispheres
160.1
1831
Male, age 72, unknown
152.2
1840
Male, age 53, unknown
136.5
2464
Female, age 72, unknown
124.3
Periaquaductal grey, lateral nTPM: 155.4
2272
Male, age 74, both hemispheres
201.4
2140
Male, age 76, both hemispheres
139.8
2053
Male, age 18, unknown
124.9
Pretectal area nTPM: 277.9
2667
Female, age 75, unknown
447.0
1816
Male, age 51, unknown
403.5
1944
Female, age 72, unknown
398.3
2007
Male, age 72, unknown
368.5
1817
Female, age 42, unknown
337.0
2224
Female, age 72, unknown
270.5
1815
Male, age 53, unknown
263.9
2273
Male, age 74, both hemispheres
157.4
2825
Male, age 18, unknown
156.4
2407
Male, age 75, both hemispheres
144.0
2316
Male, age 76, right hemisphere
110.6
Red nucleus nTPM: 156.7
2785
Male, age 18, unknown
236.1
1954
Female, age 42, unknown
201.8
1821
Female, age 72, unknown
195.9
2725
Female, age 75, unknown
163.0
2503
Female, age 72, unknown
156.9
1904
Male, age 53, unknown
151.8
2227
Male, age 72, unknown
144.0
2769
Male, age 72, unknown
142.7
1865
Male, age 51, unknown
142.5
2584
Male, age 75, left hemisphere
125.4
2588
Male, age 74, left hemisphere
113.1
2823
Male, age 76, right hemisphere
107.6
Substantia nigra nTPM: 280.4
1916
Female, age 42, unknown
513.7
1941
Male, age 53, unknown
368.9
2665
Male, age 74, both hemispheres
344.5
1851
Male, age 51, unknown
324.8
1889
Female, age 72, unknown
317.8
2409
Female, age 72, unknown
240.1
2241
Male, age 72, unknown
226.7
2699
Male, age 18, unknown
190.6
2590
Female, age 75, unknown
158.2
2583
Male, age 75, right hemisphere
118.2
Superior colliculus nTPM: 178.0
2087
Female, age 72, unknown
354.8
1796
Male, age 53, unknown
242.2
2261
Male, age 18, unknown
227.1
2668
Female, age 75, unknown
174.9
2664
Male, age 75, both hemispheres
157.9
1913
Female, age 42, unknown
152.2
1839
Male, age 51, unknown
131.5
1895
Male, age 76, right hemisphere
113.4
1995
Male, age 72, unknown
113.3
2587
Male, age 74, left hemisphere
113.1
Ventral tegmental area nTPM: 270.8
2410
Female, age 72, unknown
370.2
2218
Male, age 76, both hemispheres
345.9
1915
Female, age 42, unknown
332.8
2021
Male, age 53, unknown
217.3
1942
Male, age 51, unknown
213.5
2223
Female, age 72, unknown
144.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
216.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 216.1
Samples: 139
Max nTPM: 824.1
Min nTPM: 9.5
Std nTPM: 180.0
Median nTPM: 162.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
824.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
754.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
720.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
657.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
599.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
590.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
554.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
513.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
510.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
508.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
500.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
493.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
476.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
473.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
469.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
468.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
464.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
459.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
455.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
445.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
437.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
426.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
416.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
415.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
413.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
410.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
383.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
368.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
367.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
365.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
362.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
351.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
334.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
334.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
331.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
329.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
319.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
314.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
307.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
306.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
304.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
298.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
291.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
285.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
283.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
274.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
269.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
257.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
246.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
245.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
243.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
240.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
239.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
234.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
228.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
226.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
216.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
215.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
211.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
211.1
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
210.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
209.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
194.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
186.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
181.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
174.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
174.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
171.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
164.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
162.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
162.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
159.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
150.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
147.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
146.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
135.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
131.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
127.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
127.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
126.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
119.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
115.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
107.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
105.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
103.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
103.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
103.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
102.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
93.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
92.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
91.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
89.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
89.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
89.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
85.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
83.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
81.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
79.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
76.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
76.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
72.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
71.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
70.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
68.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
68.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
62.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
60.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
59.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
58.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
57.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
55.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
54.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
53.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
50.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
50.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
48.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
48.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
41.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
40.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
39.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
36.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
35.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
33.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
32.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
32.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
32.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
30.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
30.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
29.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
28.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
24.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
23.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
23.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
21.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
19.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
19.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
18.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
18.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
9.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
344.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 344.3
Samples: 4
Max nTPM: 368.0
Min nTPM: 313.6
Sample A
Male
362.3
Sample B
Male
333.2
Sample C
Female
313.6
Sample D
Female
368.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.