HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:168.1 nTPM
HPA Brain:131.9 nTPM
GTEx:168.1 nTPM
FANTOM5:67.2 Scaled Tags Per Million
Pig:84.4 nTPM
Mouse:191.4 nTPM
Allen mouse:7.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 131.9
Sample id Sample description nTPM
Hippocampus
nTPM: 99.0
1898 Male, age 80, left hemisphere 138.6
1855 Male, age 76, left hemisphere 108.6
2621 Female, age 67, right hemisphere 100.6
2148 Female, age 91, left hemisphere 86.0
1911 Female, age 85, right hemisphere 81.3
2529 Female, age 94, left hemisphere 78.8
Dentate gyrus
nTPM: 109.2
2530 Female, age 94, left hemisphere 130.5
1927 Female, age 91, both hemispheres 118.6
2010 Male, age 76, both hemispheres 105.2
2246 Female, age 85, both hemispheres 104.8
2531 Female, age 67, both hemispheres 101.9
2528 Male, age 74, both hemispheres 94.4
Entorhinal gyrus
nTPM: 106.9
2613 Female, age 94, left hemisphere 129.9
2764 Male, age 80, right hemisphere 121.0
1787 Male, age 76, left hemisphere 115.7
1938 Female, age 85, left hemisphere 111.2
2117 Female, age 91, right hemisphere 84.4
2686 Male, age 75, right hemisphere 79.3
Hippocampus, CA1
nTPM: 112.3
2749 Male, age 80, left hemisphere 158.1
2045 Male, age 76, both hemispheres 112.1
1873 Female, age 85, both hemispheres 107.7
2082 Female, age 91, right hemisphere 103.0
2527 Male, age 74, both hemispheres 80.8
Hippocampus, CA2
nTPM: 101.3
1963 Male, age 80, left hemisphere 120.5
2437 Female, age 94, left hemisphere 114.1
1892 Male, age 76, both hemispheres 110.0
1940 Female, age 85, left hemisphere 90.5
2249 Male, age 74, both hemispheres 90.5
2113 Female, age 91, right hemisphere 81.9
Hippocampus, CA3
nTPM: 104.6
2137 Male, age 80, left hemisphere 121.2
2620 Female, age 94, left hemisphere 120.3
1867 Male, age 76, both hemispheres 108.6
2861 Female, age 67, both hemispheres 107.2
2436 Male, age 74, both hemispheres 88.4
1891 Female, age 85, both hemispheres 81.6
Parahippocampal cortex
nTPM: 99.9
1850 Male, age 80, both hemispheres 113.9
1933 Female, age 85, both hemispheres 112.8
2693 Female, age 94, both hemispheres 109.0
2250 Female, age 67, right hemisphere 105.0
1990 Female, age 91, right hemisphere 104.7
2245 Female, age 91, both hemispheres 104.5
2018 Male, age 76, both hemispheres 100.3
2532 Female, age 72, left hemisphere 90.2
2622 Female, age 67, right hemisphere 84.5
2692 Male, age 74, both hemispheres 73.8
Perirhinal gyrus
nTPM: 131.9
1847 Female, age 91, left hemisphere 157.8
1794 Male, age 80, right hemisphere 146.9
1841 Female, age 85, right hemisphere 128.3
2521 Female, age 94, right hemisphere 120.8
2848 Male, age 76, right hemisphere 105.5
Subiculum
nTPM: 93.7
1977 Female, age 85, both hemispheres 115.4
1901 Male, age 80, both hemispheres 102.5
2438 Female, age 94, left hemisphere 93.0
2619 Male, age 74, both hemispheres 86.0
2042 Male, age 76, both hemispheres 84.8
2729 Female, age 91, right hemisphere 80.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 168.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 168.1
Samples: 255

Max nTPM: 379.7
Min nTPM: 51.3
Std nTPM: 55.2
Median nTPM: 166.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 379.7
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 379.4
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 305.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 303.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 301.6
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 296.6
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 288.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 286.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 273.8
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 271.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 269.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 67.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.2
FF:10169-103B7 60 years, female 70.6
FF:10153-102I9 76 years, female 63.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 84.4
Pig sample Sample description nTPM
Subiculum
nTPM: 59.9
Samples: 4

Max nTPM: 81.0
Min nTPM: 48.1
Sample A Female 81.0
Sample B Female 55.3
Sample C Male 55.3
Sample D Male 48.1
Dorsal hippocampus
nTPM: 84.5
Samples: 4

Max nTPM: 106.1
Min nTPM: 63.2
Sample A Female 106.1
Sample B Female 91.5
Sample C Male 63.2
Sample D Male 77.0
Entorhinal cortex
nTPM: 64.6
Samples: 4

Max nTPM: 74.3
Min nTPM: 54.7
Sample A Female 67.1
Sample B Female 74.3
Sample C Male 62.3
Sample D Male 54.7
Ventral hippocampus
nTPM: 74.3
Samples: 4

Max nTPM: 91.4
Min nTPM: 48.7
Sample A Female 73.9
Sample B Female 48.7
Sample C Male 83.0
Sample D Male 91.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 191.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 176.7
Samples: 4

Max nTPM: 189.4
Min nTPM: 169.3
Sample A Male 172.7
Sample B Male 189.4
Sample C Female 169.3
Sample D Female 175.5
Hippocampal formation
nTPM: 191.4
Samples: 4

Max nTPM: 204.7
Min nTPM: 180.7
Sample A Male 194.8
Sample B Male 185.3
Sample C Female 180.7
Sample D Female 204.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
69526791 Antisense, RP_050421_01_F05, Mouse strain C57BL/6J (56 days, male) 9.3
81600128 Antisense, RP_080306_04_E09, Mouse strain C57BL/6J (56 days, male) 4.8

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