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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:84.5 nTPM
HPA Brain:47.6 nTPM
GTEx:84.5 nTPM
FANTOM5:132.6 Scaled Tags Per Million
Pig:154.8 nTPM
Mouse:5.0 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044153Antibody HPA054811Antibody CAB001974
Glial cells Not detectedNot detectedMedium
Neuronal cells Not detectedNot detected-







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 46.4
2481 Female, age 94, left hemisphere 74.6
2289 Male, age 61, right hemisphere 61.8
2290 Female, age 72, unknown 59.7
2288 Male, age 75, left hemisphere 47.5
1857 Female, age 85, left hemisphere 39.5
1781 Male, age 74, unknown 35.6
1854 Male, age 80, left hemisphere 27.5
2846 Female, age 79, unknown 25.1
Globus pallidus, externus
nTPM: 47.6
1996 Male, age 80, right hemisphere 62.1
2646 Male, age 61, right hemisphere 59.0
2567 Female, age 72, unknown 41.3
2395 Male, age 75, both hemispheres 39.0
2772 Female, age 79, unknown 36.5
Globus pallidus, internus
nTPM: 43.2
2037 Male, age 80, right hemisphere 52.0
2483 Female, age 94, right hemisphere 49.4
2287 Male, age 75, right hemisphere 46.0
1818 Male, age 74, unknown 41.8
2566 Female, age 72, unknown 39.6
2778 Female, age 91, both hemispheres 38.6
2111 Female, age 85, right hemisphere 35.2
Nucleus accumbens
nTPM: 29.9
2286 Male, age 75, left hemisphere 41.5
2698 Female, age 72, unknown 41.4
2391 Female, age 94, left hemisphere 36.0
1806 Female, age 85, left hemisphere 35.0
2732 Male, age 80, right hemisphere 28.6
1783 Male, age 74, unknown 24.7
2824 Male, age 61, right hemisphere 18.7
1856 Female, age 91, right hemisphere 13.2
Nucleus basalis of Meynert
nTPM: 40.0
2569 Male, age 61, both hemispheres 59.2
2821 Male, age 75, both hemispheres 43.6
2484 Female, age 94, left hemisphere 35.1
2393 Male, age 80, right hemisphere 22.0
Nucleus of the diagonal band
nTPM: 17.2
1812 Female, age 91, both hemispheres 22.4
1979 Male, age 74, unknown 21.8
2195 Female, age 85, both hemispheres 17.3
2775 Male, age 80, right hemisphere 12.9
2029 Male, age 61, right hemisphere 11.6
Putamen
nTPM: 31.3
2482 Female, age 94, left hemisphere 41.7
2489 Female, age 72, unknown 39.9
2647 Male, age 75, left hemisphere 37.3
1829 Male, age 74, unknown 33.3
1838 Male, age 80, right hemisphere 25.6
1937 Female, age 91, right hemisphere 22.3
2466 Female, age 79, unknown 18.7
Septal nuclei
nTPM: 17.8
2629 Female, age 94, right hemisphere 29.2
2199 Male, age 80, right hemisphere 24.6
2059 Female, age 85, both hemispheres 18.6
2394 Male, age 61, left hemisphere 16.2
2009 Female, age 91, both hemispheres 14.3
1960 Male, age 74, unknown 11.4
2031 Female, age 72, unknown 10.5
Stria terminalis, bed nucleus
nTPM: 22.8
2201 Male, age 74, unknown 29.0
2486 Female, age 94, both hemispheres 20.1
1974 Female, age 91, both hemispheres 19.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 73.6
Samples: 246

Max nTPM: 249.9
Min nTPM: 12.1
Std nTPM: 36.7
Median nTPM: 65.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 249.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 194.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 169.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 166.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 159.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 152.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 150.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 149.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 149.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 147.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 146.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 146.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 145.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 142.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 141.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 140.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 140.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 140.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 139.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 138.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 136.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 134.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 134.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 133.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 129.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 129.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 126.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 123.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 123.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 121.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 121.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 119.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 116.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 114.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 114.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 112.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 111.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 110.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 109.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 109.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 108.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 108.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 108.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 107.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 104.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 103.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 102.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 102.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 101.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 101.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 101.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 100.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 100.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 99.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 98.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 96.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 96.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 96.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 95.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 95.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 95.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 95.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 93.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 93.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 93.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 93.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 93.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 92.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 92.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 91.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 90.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 90.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 89.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 88.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 87.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 87.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 87.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 83.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 82.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 82.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 79.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 79.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 79.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 78.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 78.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 78.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 76.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 76.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 76.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 76.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 75.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 75.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 75.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 75.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 75.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 74.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 73.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 73.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 73.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 73.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 72.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 71.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 71.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 71.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 70.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 70.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 68.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 67.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 67.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 67.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 67.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 66.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 66.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 65.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 65.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 65.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 65.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 64.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 64.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 64.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 63.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 62.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 61.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 60.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 60.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 59.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 59.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 59.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 59.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 58.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 58.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 57.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 57.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 57.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 57.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 57.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 57.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 57.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 56.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 56.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 56.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 56.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 56.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 56.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 55.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 55.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 54.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 54.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 53.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 52.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 52.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 52.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 52.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 51.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 51.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 51.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 50.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 50.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 50.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 49.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 48.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 48.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 47.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 47.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 47.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 47.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 46.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 46.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 45.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 45.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 45.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 45.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 44.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 44.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 43.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 42.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 42.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 42.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 42.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 42.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 42.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 41.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 40.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 39.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 39.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 39.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 39.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 39.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 38.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 38.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 38.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 37.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 37.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 37.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 36.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 36.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 36.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 35.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 34.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 33.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 33.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 31.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 30.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 30.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 28.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 27.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 27.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 26.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 26.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 26.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 25.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 25.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 25.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 24.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 24.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 24.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 21.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 21.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 12.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 12.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 44.9
Samples: 246

Max nTPM: 168.2
Min nTPM: 12.1
Std nTPM: 26.2
Median nTPM: 37.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 168.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 162.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 148.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 132.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 121.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 117.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 115.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 110.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 104.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 102.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 101.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 101.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 100.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 100.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 99.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 97.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 96.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 96.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 95.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 94.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 92.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 90.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 89.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 85.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 83.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 79.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 77.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 76.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 76.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 74.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 74.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 74.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 73.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 71.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 70.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 66.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 65.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 63.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 63.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 62.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 61.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 61.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 61.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 59.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 59.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 59.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 58.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 56.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 56.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 56.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 55.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 55.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 55.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 54.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 53.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 53.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 52.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 52.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 52.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 52.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 51.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 50.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 50.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 50.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 49.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 49.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 49.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 49.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 49.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 49.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 49.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 49.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 49.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 49.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 48.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 48.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 47.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 47.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 47.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 47.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 46.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 46.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 46.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 46.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 46.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 45.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 45.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 45.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 45.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 45.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 44.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 44.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 43.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 42.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 42.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 42.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 42.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 41.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 41.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 41.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 41.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 40.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 40.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 40.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 40.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 39.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 39.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 39.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 39.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 39.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 39.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 38.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 38.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 38.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 38.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 38.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 38.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 38.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 38.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 38.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 37.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 37.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 37.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 37.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 37.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 37.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 37.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 36.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 36.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 36.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 36.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 35.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 35.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 35.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 35.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 35.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 34.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 34.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 34.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 34.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 34.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 34.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 34.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 34.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 34.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 34.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 34.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 33.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 33.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 33.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 33.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 32.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 32.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 32.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 32.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 32.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 32.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 32.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 31.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 31.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 31.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 30.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 30.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 30.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 30.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 30.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 30.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 30.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 30.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 30.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 30.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 30.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 30.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 29.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 29.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 29.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 29.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 28.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 28.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 28.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 28.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 28.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 28.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 28.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 27.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 27.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 27.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 27.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 27.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 27.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 27.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 27.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 27.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 27.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 27.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 26.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 26.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 26.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 26.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 26.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 26.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 26.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 25.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 25.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 24.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 24.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 24.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 23.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 23.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 23.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 23.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 23.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 23.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 23.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 23.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 22.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 22.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 22.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 22.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 22.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 22.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 21.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 21.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 21.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 21.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 21.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 21.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 20.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 20.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 20.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 20.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 20.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 19.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 19.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 19.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 18.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 17.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 17.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 17.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 16.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 16.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 16.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 14.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 13.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 12.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.1
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Brain - Putamen (basal ganglia)
Average nTPM: 84.5
Samples: 205

Max nTPM: 484.6
Min nTPM: 19.1
Std nTPM: 51.4
Median nTPM: 71.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 484.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 253.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 214.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 205.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 201.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 196.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 194.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 188.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 186.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 183.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 167.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 163.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 162.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 159.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 159.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 157.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 155.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 145.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 144.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 143.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 142.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 139.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 137.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 136.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 135.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 134.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 134.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 132.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 128.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 127.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 126.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 124.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 124.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 124.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 123.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 123.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 123.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 122.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 122.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 121.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 119.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 119.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 118.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 117.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 116.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 116.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 112.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 112.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 112.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 111.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 110.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 109.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 109.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 107.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 107.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 106.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 106.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 105.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 105.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 105.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 102.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 101.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 101.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 97.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 97.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 96.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 96.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 93.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 92.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 91.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 91.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 91.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 91.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 89.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 89.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 88.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 87.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 87.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 86.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 84.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 84.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 82.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 82.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 82.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 82.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 81.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 80.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 79.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 79.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 79.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 79.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 79.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 78.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 77.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 77.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 76.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 75.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 74.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 72.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 72.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 72.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 72.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 71.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 69.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 68.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 68.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 68.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 68.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 67.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 67.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 65.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 64.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 64.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 64.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 63.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 62.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 62.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 61.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 61.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 61.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 60.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 60.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 60.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 60.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 59.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 59.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 59.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 59.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 59.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 58.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 58.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 58.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 57.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 57.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 56.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 56.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 56.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 55.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 55.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 55.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 55.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 55.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 54.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 54.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 54.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 53.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 52.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 52.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 50.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 50.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 50.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 49.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 49.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 49.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 49.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 48.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 48.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 47.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 47.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 47.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 46.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 46.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 46.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 45.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 45.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 44.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 44.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 44.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 44.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 44.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 44.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 43.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 43.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 43.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 42.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 41.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 41.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 40.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 40.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 38.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 38.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 38.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 37.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 37.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 36.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 36.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 36.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 36.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 36.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 36.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 33.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 32.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 32.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 32.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 30.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 30.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 28.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 27.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 27.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 25.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 22.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 21.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 19.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

132.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 89.5
FF:10164-103B2 76 years, female 89.5
Nucleus accumbens
Scaled Tags Per Million: 78.2
FF:10037-101F1 23-56 years, mixed 78.2
Putamen
Scaled Tags Per Million: 70.8
FF:10176-103C5 60 years, female 70.8
Globus pallidus
Scaled Tags Per Million: 132.6
FF:10161-103A8 76 years, female 179.8
FF:10175-103C4 60 years, female 85.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.8
Pig sample Sample description nTPM
Caudate
nTPM: 95.8
Samples: 4

Max nTPM: 136.3
Min nTPM: 67.7
Sample A Female 67.7
Sample B Female 104.4
Sample C Male 136.3
Sample D Male 74.6
Putamen
nTPM: 154.8
Samples: 4

Max nTPM: 222.2
Min nTPM: 73.9
Sample A Female 73.9
Sample B Female 166.7
Sample C Male 222.2
Sample D Male 156.3
Septum
nTPM: 52.2
Samples: 4

Max nTPM: 62.7
Min nTPM: 39.4
Sample A Female 39.4
Sample B Female 53.0
Sample C Male 62.7
Sample D Male 53.8
Ventral pallidum
nTPM: 79.5
Samples: 4

Max nTPM: 126.2
Min nTPM: 51.6
Sample A Female 67.7
Sample B Female 126.2
Sample C Male 72.4
Sample D Male 51.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 4.8
Samples: 4

Max nTPM: 5.2
Min nTPM: 4.4
Sample A Male 5.2
Sample B Male 4.6
Sample C Female 5.0
Sample D Female 4.4
Septum
nTPM: 5.0
Samples: 4

Max nTPM: 7.3
Min nTPM: 2.7
Sample A Male 7.3
Sample B Male 2.7
Sample C Female 6.6
Sample D Female 3.3
Ventral forebrain
nTPM: 3.1
Samples: 4

Max nTPM: 4.7
Min nTPM: 2.3
Sample A Male 3.0
Sample B Male 4.7
Sample C Female 2.3
Sample D Female 2.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
69735162 Antisense, RP_050503_02_B12, Mouse strain C57BL/6J (56 days, male) 0.0
74882616 Antisense, RP_060315_04_F07, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
69735162 Antisense, RP_050503_02_B12, Mouse strain C57BL/6J (56 days, male) 0.0
74882616 Antisense, RP_060315_04_F07, Mouse strain C57BL/6J (56 days, male) 0.0

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