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  • TISSUE

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  • PSMB1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:134.7 nTPM
HPA Brain:94.7 nTPM
GTEx:134.7 nTPM
Pig:118.8 nTPM
Mouse:155.0 nTPM
Allen mouse:6.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 94.7
2226 Male, age 75, left hemisphere 110.6
1961 Female, age 42, unknown 78.8
Dorsomedial nucleus
nTPM: 71.1
2041 Female, age 72, unknown 80.1
1989 Male, age 62, unknown 67.4
2017 Female, age 42, unknown 65.7
Lateral hypothalamic area
nTPM: 84.1
1791 Male, age 80, right hemisphere 96.1
2228 Male, age 66, unknown 91.4
2271 Male, age 75, both hemispheres 87.9
2412 Male, age 62, unknown 60.9
Mammillary body
nTPM: 75.8
1923 Female, age 72, unknown 87.5
2413 Male, age 66, unknown 75.8
1948 Female, age 72, unknown 75.6
1945 Male, age 80, right hemisphere 75.5
1834 Female, age 42, unknown 64.4
Paraventricular nucleus
nTPM: 63.8
2700 Male, age 62, unknown 63.8
Preoptic area
nTPM: 74.0
1907 Male, age 80, right hemisphere 87.6
1861 Female, age 42, unknown 70.8
2414 Female, age 72, unknown 63.7
Supraoptic nucleus
nTPM: 83.5
1894 Female, age 72, unknown 103.3
2043 Male, age 62, unknown 84.7
2835 Female, age 72, unknown 62.6
Ventromedial nucleus
nTPM: 78.6
1982 Female, age 72, unknown 86.7
1822 Female, age 42, unknown 70.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 134.7
Samples: 257

Max nTPM: 264.9
Min nTPM: 80.2
Std nTPM: 25.6
Median nTPM: 133.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 264.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 219.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 217.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 206.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 204.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 203.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 198.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 191.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 189.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 188.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 182.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 180.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 180.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 179.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 179.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 173.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 173.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 173.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 173.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 172.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 170.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 167.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 166.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 166.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 165.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 165.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 165.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 162.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 162.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 162.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 161.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 161.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 160.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 159.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 159.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 159.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 159.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 158.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 158.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 158.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 158.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 157.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 156.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 155.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 154.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 154.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 153.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 153.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 152.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 152.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 152.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 151.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 151.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 151.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 151.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 150.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 150.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 149.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 149.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 148.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 148.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 148.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 148.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 147.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 147.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 146.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 146.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 145.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 145.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 145.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 145.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 144.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 144.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 143.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 143.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 143.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 143.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 142.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 142.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 142.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 142.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 142.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 142.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 141.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 141.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 141.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 141.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 140.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 140.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 140.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 140.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 140.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 140.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 139.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 139.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 139.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 139.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 139.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 138.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 138.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 138.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 138.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 138.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 138.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 137.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 137.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 137.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 137.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 137.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 137.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 137.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 137.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 137.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 136.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 136.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 136.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 136.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 136.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 135.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 135.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 135.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 135.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 134.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 134.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 134.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 134.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 134.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 134.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 133.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 133.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 133.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 133.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 132.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 132.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 132.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 131.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 131.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 131.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 131.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 131.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 130.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 130.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 129.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 129.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 129.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 128.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 128.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 128.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 128.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 128.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 127.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 127.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 127.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 127.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 126.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 126.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 126.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 126.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 125.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 125.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 125.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 125.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 125.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 124.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 124.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 124.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 124.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 124.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 124.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 124.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 123.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 123.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 123.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 123.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 123.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 122.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 122.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 122.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 122.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 122.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 122.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 121.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 121.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 121.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 121.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 121.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 121.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 120.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 120.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 120.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 120.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 120.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 119.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 119.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 119.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 119.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 119.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 118.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 118.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 118.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 117.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 116.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 116.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 115.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 115.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 115.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 115.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 114.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 114.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 112.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 112.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 112.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 111.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 110.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 110.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 110.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 109.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 109.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 108.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 108.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 108.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 108.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 105.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 104.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 104.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 104.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 103.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 103.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 103.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 103.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 103.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 102.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 102.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 101.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 100.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 100.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 100.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 99.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 99.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 99.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 99.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 99.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 99.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 99.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 98.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 98.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 97.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 97.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 97.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 95.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 94.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 88.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 88.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 86.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 85.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 84.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 80.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 118.8
Samples: 4

Max nTPM: 148.1
Min nTPM: 97.3
Sample A Female 148.1
Sample B Female 121.4
Sample C Male 108.5
Sample D Male 97.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 155.0
Samples: 4

Max nTPM: 173.3
Min nTPM: 143.2
Sample A Male 145.7
Sample B Male 173.3
Sample C Female 157.6
Sample D Female 143.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.8
74059243 Antisense, RP_051121_03_C07, Mouse strain C57BL/6J (56 days, male) 6.8

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