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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:38.0 nTPM
HPA Brain:215.4 nTPM
GTEx:38.0 nTPM
Pig:132.1 nTPM
Mouse:19.7 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

215.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 97.1
1961 Female, age 42, unknown 97.2
2226 Male, age 75, left hemisphere 96.9
Dorsomedial nucleus
nTPM: 169.2
2017 Female, age 42, unknown 198.7
1989 Male, age 62, unknown 174.9
2041 Female, age 72, unknown 134.1
Lateral hypothalamic area
nTPM: 145.6
2271 Male, age 75, both hemispheres 160.4
2412 Male, age 62, unknown 148.0
1791 Male, age 80, right hemisphere 138.3
2228 Male, age 66, unknown 135.8
Mammillary body
nTPM: 193.1
1834 Female, age 42, unknown 255.4
1945 Male, age 80, right hemisphere 229.6
1948 Female, age 72, unknown 192.3
2413 Male, age 66, unknown 154.9
1923 Female, age 72, unknown 133.0
Paraventricular nucleus
nTPM: 191.4
2700 Male, age 62, unknown 191.4
Preoptic area
nTPM: 163.5
2414 Female, age 72, unknown 207.6
1861 Female, age 42, unknown 196.2
1907 Male, age 80, right hemisphere 86.8
Supraoptic nucleus
nTPM: 215.4
2043 Male, age 62, unknown 257.0
1894 Female, age 72, unknown 214.5
2835 Female, age 72, unknown 174.8
Ventromedial nucleus
nTPM: 99.8
1822 Female, age 42, unknown 106.7
1982 Female, age 72, unknown 93.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 38.0
Samples: 257

Max nTPM: 98.1
Min nTPM: 8.5
Std nTPM: 16.1
Median nTPM: 35.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 98.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 93.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 84.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 79.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 79.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 77.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 77.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 73.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 72.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 71.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 71.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 71.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 69.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 68.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 67.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 66.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 66.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 66.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 65.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 65.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 65.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 65.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 64.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 64.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 62.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 62.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 61.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 61.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 61.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 61.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 60.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 58.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 58.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 56.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 56.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 55.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 55.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 54.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 54.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 54.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 54.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 53.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 53.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 52.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 52.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 52.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 51.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 50.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 50.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 50.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 50.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 49.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 49.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 49.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 48.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 48.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 48.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 48.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 48.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 48.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 48.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 47.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 47.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 46.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 46.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 45.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 45.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 45.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 45.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 45.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 45.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 44.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 44.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 44.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 44.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 44.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 44.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 44.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 43.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 43.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 43.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 43.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 43.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 42.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 42.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 42.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 42.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 42.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 41.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 41.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 41.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 41.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 40.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 40.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 40.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 40.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 40.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 39.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 39.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 39.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 39.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 39.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 38.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 38.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 38.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 38.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 38.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 38.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 38.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 38.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 37.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 37.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 37.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 37.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 37.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 37.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 37.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 36.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 36.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 36.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 36.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 36.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 36.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 35.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 35.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 35.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 35.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 35.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 35.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 35.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 35.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 35.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 34.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 34.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 34.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 34.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 34.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 34.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 34.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 33.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 33.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 33.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 32.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 32.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 32.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 32.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 32.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 31.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 31.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 31.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 31.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 31.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 30.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 30.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 30.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 30.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 30.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 30.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 30.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 30.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 29.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 29.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 29.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 29.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 29.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 29.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 29.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 29.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 29.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 28.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 28.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 28.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 28.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 28.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 28.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 27.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 27.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 27.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 27.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 27.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 27.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 27.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 27.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 27.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 26.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 26.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 26.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 26.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 26.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 26.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 26.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 26.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 26.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 26.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 25.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 25.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 25.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 25.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 25.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 25.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 25.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 25.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 24.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 24.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 24.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 24.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 24.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 24.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 23.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 23.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 23.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 23.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 23.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 23.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 22.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 22.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 22.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 22.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 22.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 21.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 21.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 21.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 21.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 21.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 21.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 21.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 21.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 21.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 21.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 21.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 21.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 20.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 20.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 19.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 19.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 18.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 18.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 18.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 18.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 17.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 17.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 17.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 16.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 16.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 15.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 15.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 15.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 15.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 14.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 14.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 14.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 12.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 12.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 8.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 8.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 132.1
Samples: 4

Max nTPM: 147.8
Min nTPM: 97.0
Sample A Female 135.7
Sample B Female 147.8
Sample C Male 147.8
Sample D Male 97.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 19.7
Samples: 4

Max nTPM: 21.7
Min nTPM: 17.7
Sample A Male 21.7
Sample B Male 19.9
Sample C Female 17.7
Sample D Female 19.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.2
77620379 Antisense, RP_070205_01_D12, Mouse strain C57BL/6J (56 days, male) 1.6
77413698 Antisense, RP_070205_01_D12, Mouse strain C57BL/6J (56 days, male) 1.0
2424 Antisense, RP_Baylor_102930, Mouse strain C57BL/6J (56 days, male) 0.9
2423 Antisense, RP_Baylor_102930, Mouse strain C57BL/6J (56 days, male) 0.0

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