On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
311.2
nTPM
HPA Brain:
326.2
nTPM
GTEx:
311.2
nTPM
Macaque:
199.2
nTPM
Mouse:
495.4
nTPM
Rat:
162.3
nTPM
Pig:
138.9
nTPM
HYPOTHALAMUS - SINGLE NUCLEI RNA EXPRESSIONi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NEURONSi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Unassigned AVP+
c-2
Excitatory (VGLUT2) TAC1+
c-3
Inhibitory (GAD1/2) AVP+
c-4
Unassigned AVP+
c-5
Excitatory (VGLUT2)
c-6
Excitatory (VGLUT2)
c-7
Inhibitory (GAD1/2) DRD2+ L...
c-8
Inhibitory (GAD1/2) ESR1+
c-9
Excitatory (VGLUT2)
c-10
Excitatory (VGLUT2) TAC1+
c-11
Inhibitory (GAD1/2) ESR1+
c-12
Inhibitory (GAD1/2) DRD1+ L...
c-13
Excitatory (VGLUT2)
c-14
Inhibitory (GAD1/2)
c-15
Excitatory (VGLUT2)
c-16
Excitatory (VGLUT2)
c-17
Inhibitory (GAD1/2)
c-18
Inhibitory (GAD1/2) GAL+
c-19
Excitatory (VGLUT1)
c-20
Excitatory (VGLUT2) ESR1+
c-21
Inhibitory (GAD1/2) DRD1+ L...
c-22
Inhibitory (GAD1/2) RORB+ K
c-23
Inhibitory (GAD1/2) SST+ NP
c-24
Inhibitory (GAD1/2) CXCL14+
c-25
Excitatory (VGLUT2)
c-26
Inhibitory (GAD1/2)
c-27
Excitatory (VGLUT2)
c-28
Unassigned
c-29
Inhibitory (GAD1/2) ESR1+
c-30
Excitatory (VGLUT2)
c-31
Excitatory (VGLUT1/2)
c-32
Inhibitory (GAD1/2) GAL+
c-33
Excitatory (VGLUT2)
c-34
Monoaminergic Inhibitory (G...
c-35
Excitatory (VGLUT2) TAC1+
c-36
Inhibitory (GAD1/2) LHX6+ T...
c-37
Excitatory (VGLUT2)
c-38
Inhibitory (GAD1/2) SST+
c-39
Inhibitory (GAD1/2) MEIS2+
c-40
Unassigned
c-41
Inhibitory (GAD1/2) SST+
c-42
Excitatory (VGLUT1)
c-43
Excitatory (VGLUT2) TAC1+
c-44
Unassigned AVP+
c-45
Inhibitory (GAD1/2) LAMP5+ ...
c-46
Excitatory (VGLUT2)
c-47
Inhibitory (GAD1/2) LHX6+ T...
c-48
Parvocellular CRH+ AVP+ OXT
c-49
Magnocellular TH+ AVP+ OXT+
c-50
Excitatory (VGLUT1)
c-51
Parvocellular (VGLUT2) AVP...
c-52
Inhibitory (GAD1/2) NOS1+ M...
c-53
Inhibitory (GAD1/2) TAC1+ D...
c-54
Inhibitory (GAD1/2) SST+
c-55
Excitatory (VGLUT1)
c-56
Excitatory (VGLUT1) ETV1+ Z...
c-57
HCRT+ RXF4+
c-58
Excitatory (VGLUT1/2) TAC1+
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NON-NEURONALi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Oligodendrocytes
c-2
Oligodendrocytes
c-3
Oligodendrocytes
c-4
Astrocytes (LHX2+)
c-5
Microglia
c-6
Oligodendrocytes
c-7
Astrocytes (CD44+)
c-8
Oligodendrocytes
c-9
Oligodendrocyte progenitor ...
c-10
Microglia
c-11
Oligodendrocytes
c-12
Astrocytes
c-13
Astrocytes (CD44+)
c-14
Oligodendrocyte progenitor ...
c-15
Oligodendrocyte progenitor ...
c-16
Microglia
c-17
Oligodendrocytes
c-18
Oligodendrocyte progenitor ...
c-19
Astrocytes
c-20
Fibroblasts
c-21
Oligodendrocytes
c-22
Oligodendrocytes
c-23
Ependymal cells
c-24
Vascular endothelial cells
c-25
Astrocytes (LHX2+)
c-26
Macrophages
c-27
Astrocytes
c-28
T-cells
c-29
Vascular smooth muscle cell
c-30
Fibroblasts (BNC2+ KCNMA1+ ...
c-31
Pericytes
c-32
Oligodendrocyte progenitor ...
c-33
Immature oligodendrocytes
c-34
Oligodendrocyte progenitor ...
c-35
NK-cells
c-36
Mural cells
c-37
Monocytes
c-38
Fibroblasts (BNC2+ TRPM3+)
c-39
Lymphocytes
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
326.2
Sample id
Sample description
nTPM
Arcuate nucleus nTPM: 321.0
2226
Male, age 75, left hemisphere
503.9
1961
Female, age 42, unknown
138.1
Dorsomedial nucleus nTPM: 181.0
1989
Male, age 62, unknown
241.6
2041
Female, age 72, unknown
169.9
2017
Female, age 42, unknown
131.5
Lateral hypothalamic area nTPM: 319.0
2228
Male, age 66, unknown
473.0
2271
Male, age 75, both hemispheres
349.9
1791
Male, age 80, right hemisphere
287.7
2412
Male, age 62, unknown
165.5
Mammillary body nTPM: 326.2
1923
Female, age 72, unknown
625.6
2413
Male, age 66, unknown
291.3
1948
Female, age 72, unknown
264.5
1834
Female, age 42, unknown
233.0
1945
Male, age 80, right hemisphere
216.4
Paraventricular nucleus nTPM: 134.0
2700
Male, age 62, unknown
134.0
Preoptic area nTPM: 193.9
1907
Male, age 80, right hemisphere
255.5
1861
Female, age 42, unknown
167.5
2414
Female, age 72, unknown
158.7
Supraoptic nucleus nTPM: 168.4
1894
Female, age 72, unknown
213.1
2835
Female, age 72, unknown
162.5
2043
Male, age 62, unknown
129.6
Ventromedial nucleus nTPM: 167.6
1982
Female, age 72, unknown
192.2
1822
Female, age 42, unknown
142.9
HYPOTHALAMUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
311.2
GTEx sample id
Sample description
nTPM
Brain - Hypothalamus Average nTPM: 311.2
Samples: 257
Max nTPM: 896.1
Min nTPM: 77.4
Std nTPM: 135.5
Median nTPM: 298.6
GTEX-ZUA1-0011-R8b-SM-51MST
40-49 years, male
896.1
GTEX-11ZUS-0011-R8a-SM-5BC73
30-39 years, male
894.6
GTEX-1C6WA-0011-R8b-SM-7P8S7
60-69 years, male
865.0
GTEX-T5JC-0011-R8A-SM-32PLM
20-29 years, male
747.6
GTEX-1P4AB-0011-R8a-SM-F341R
50-59 years, male
744.5
GTEX-1LVAO-0011-R8a-SM-F3K5J
60-69 years, male
685.0
GTEX-14JIY-0011-R8a-SM-6AJAP
60-69 years, male
663.8
GTEX-ZAK1-0011-R8a-SM-H7OGE
50-59 years, female
581.4
GTEX-11DYG-0011-R8a-SM-DO93F
60-69 years, male
538.9
GTEX-1A3MX-0011-R8a-SM-7P8PI
60-69 years, male
530.3
GTEX-QVUS-0011-R8A-SM-3GAD7
60-69 years, female
522.7
GTEX-1B8L1-0011-R8b-SM-7P8ST
60-69 years, male
517.1
GTEX-1LSNL-0011-R8b-SM-F2TAH
50-59 years, male
513.9
GTEX-WL46-0011-R8B-SM-H7OHG
50-59 years, male
504.8
GTEX-117XS-0011-R8b-SM-GHWOD
60-69 years, male
504.1
GTEX-1HT8W-0011-R8b-SM-CM2SX
30-39 years, male
502.9
GTEX-11DXY-0011-R8a-SM-DO11M
60-69 years, male
493.0
GTEX-Z93S-0011-R8a-SM-4RGNL
50-59 years, male
492.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E
60-69 years, male
491.1
GTEX-11GSO-0011-R8b-SM-GJ3PM
60-69 years, male
489.2
GTEX-111FC-0011-R8b-SM-GI4VS
60-69 years, male
482.4
GTEX-15EO6-0011-R8a-SM-H6Q6R
50-59 years, male
478.8
GTEX-X585-0011-R8A-SM-46MUX
50-59 years, male
477.5
GTEX-1HB9E-0011-R8b-SM-A9G1O
50-59 years, male
470.5
GTEX-16YQH-0011-R8a-SM-7DUFB
30-39 years, male
458.3
GTEX-1LSVX-0011-R8a-SM-F2TB3
60-69 years, male
458.3
GTEX-15DYW-0011-R8b-SM-GRR3B
60-69 years, female
452.1
GTEX-11NV4-0011-R8b-SM-GHWO4
60-69 years, male
447.6
GTEX-1313W-0011-R8a-SM-5DUVM
50-59 years, female
446.3
GTEX-QMR6-0011-R8A-SM-32PKJ
50-59 years, male
446.1
GTEX-1GF9V-0011-R8b-SM-CE6RB
60-69 years, male
444.9
GTEX-13QIC-0011-R8b-SM-5O9CV
60-69 years, female
443.1
GTEX-11DZ1-0011-R8b-SM-DNZZI
50-59 years, male
437.8
GTEX-1B933-0011-R8a-SM-9QEGX
50-59 years, female
435.0
GTEX-1F6IF-0011-R8a-SM-9OSX5
60-69 years, male
434.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT
50-59 years, male
433.5
GTEX-1LH75-0011-R8b-SM-F2TB2
50-59 years, female
433.3
GTEX-13NYB-0011-R8a-SM-5KM4R
40-49 years, male
431.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ
60-69 years, male
428.6
GTEX-1H3O1-0011-R8a-SM-CL555
60-69 years, male
428.1
GTEX-15ER7-0011-R8a-SM-7KUL2
20-29 years, female
424.7
GTEX-15CHQ-0011-R8b-SM-CNPO4
60-69 years, male
423.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ
50-59 years, male
421.4
GTEX-X261-0011-R8A-SM-4E3I5
50-59 years, male
416.8
GTEX-13X6K-0011-R8b-SM-5PNZ4
60-69 years, female
416.5
GTEX-1R9PO-0011-R8a-SM-F2TA3
60-69 years, female
416.2
GTEX-1N2EE-0011-R8a-SM-F3K4X
60-69 years, male
414.3
GTEX-15RJE-0011-R8a-SM-H7OGM
40-49 years, male
413.8
GTEX-145MH-0011-R8a-SM-5PNUL
50-59 years, male
413.2
GTEX-1399T-0011-R8b-SM-5IJD8
60-69 years, male
411.1
GTEX-14DAQ-0011-R8a-SM-G9ERP
60-69 years, female
408.9
GTEX-1192X-0011-R8b-SM-DO11U
50-59 years, male
408.2
GTEX-14BMV-0011-R8a-SM-G9ERM
50-59 years, male
408.1
GTEX-1MJK2-0011-R8a-SM-F341I
50-59 years, male
406.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS
50-59 years, male
406.0
GTEX-1E1VI-0011-R8b-SM-ARU8E
50-59 years, male
405.3
GTEX-1RLM8-0011-R8a-SM-EYYXR
50-59 years, male
403.8
GTEX-12WSA-0011-R8a-SM-5P9EX
60-69 years, male
401.9
GTEX-WZTO-0011-R8A-SM-4E3II
40-49 years, male
401.6
GTEX-1GN73-0011-R8b-SM-CKZNY
60-69 years, male
401.0
GTEX-13FLW-0011-R8b-SM-5J1MZ
50-59 years, male
397.8
GTEX-1GTWX-0011-R8a-SM-CE6RM
60-69 years, male
397.7
GTEX-1JMOU-0011-R8b-SM-F2TA9
60-69 years, female
397.2
GTEX-1F75W-0011-R8a-SM-9QEI4
60-69 years, male
396.5
GTEX-131XH-0011-R8a-SM-5EGLL
50-59 years, male
392.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C
50-59 years, male
391.3
GTEX-145LU-0011-R8b-SM-5PNZG
50-59 years, male
389.1
GTEX-1IKK5-0011-R8b-SM-CJI45
60-69 years, male
386.3
GTEX-117YW-0011-R8a-SM-GINAB
50-59 years, male
385.7
GTEX-P44H-0011-R8A-SM-2XCEL
40-49 years, male
384.0
GTEX-13CIG-0011-R8b-SM-5LZX5
50-59 years, male
380.9
GTEX-1A8G6-0011-R8a-SM-7P8PD
60-69 years, male
376.1
GTEX-13RTJ-0011-R8b-SM-5O9DL
60-69 years, male
372.5
GTEX-15SHU-0011-R8a-SM-H6Q7V
40-49 years, female
371.5
GTEX-1N2EF-0011-R8a-SM-F6481
60-69 years, male
370.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6
60-69 years, male
369.0
GTEX-17HII-0011-R8a-SM-79OK6
50-59 years, male
368.7
GTEX-1C6VR-0011-R8b-SM-7MXUF
60-69 years, male
366.9
GTEX-RVPV-0011-R8A-SM-F21II
60-69 years, male
366.5
GTEX-1GMR8-0011-R8a-SM-CKZNX
50-59 years, female
366.3
GTEX-1N2DW-0011-R8a-SM-EY5YD
50-59 years, male
363.8
GTEX-1EMGI-0011-R8b-SM-9QEID
60-69 years, male
363.6
GTEX-1KD4Q-0011-R8a-SM-F341N
40-49 years, male
363.4
GTEX-13VXU-0011-R8b-SM-GJ3RR
50-59 years, male
362.8
GTEX-13N1W-0011-R8a-SM-5MR56
70-79 years, male
362.4
GTEX-1HFI6-0011-R8a-SM-ARZLP
40-49 years, male
362.1
GTEX-11OF3-0011-R8b-SM-57WCS
60-69 years, male
362.0
GTEX-13O3Q-0011-R8b-SM-5KM2J
50-59 years, male
360.9
GTEX-11DXW-0011-R8a-SM-GIN8T
40-49 years, male
355.8
GTEX-14C5O-0011-R8a-SM-5YYAG
60-69 years, male
354.3
GTEX-14PN4-0011-R8a-SM-6EU1H
50-59 years, male
353.1
GTEX-QVJO-0011-R8A-SM-447C7
60-69 years, female
352.8
GTEX-WHSE-0011-R8A-SM-3P5Z1
20-29 years, male
352.2
GTEX-11O72-0011-R8a-SM-GJ3R9
40-49 years, male
349.0
GTEX-13FXS-0011-R8a-SM-5J1MN
50-59 years, male
349.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4
60-69 years, male
347.0
GTEX-1HCU6-0011-R8a-SM-CJI3R
60-69 years, female
344.4
GTEX-1HGF4-0011-R8b-SM-CKZP9
60-69 years, male
342.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE
40-49 years, female
342.0
GTEX-14ASI-0011-R8b-SM-5S2UB
60-69 years, male
337.1
GTEX-17HG3-0011-R8a-SM-79OK7
30-39 years, female
336.2
GTEX-13OW7-0011-R8b-SM-5L3HR
50-59 years, male
335.9
GTEX-14PJM-0011-R8b-SM-69LPD
50-59 years, female
334.4
GTEX-1NV5F-0011-R8b-SM-F647Z
60-69 years, female
333.0
GTEX-1A8G7-0011-R8a-SM-7P8S6
60-69 years, male
329.1
GTEX-1F88E-0011-R8a-SM-CJI2H
60-69 years, female
328.0
GTEX-S7SE-0011-R8A-SM-F649T
50-59 years, male
326.9
GTEX-1HSKV-0011-R8a-SM-CL54X
60-69 years, male
325.6
GTEX-1RQEC-0011-R8b-SM-F648X
60-69 years, male
325.3
GTEX-12ZZX-0011-R8a-SM-5DUW8
40-49 years, female
324.8
GTEX-13OVH-0011-R8b-SM-5MR35
70-79 years, male
324.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J
60-69 years, male
322.1
GTEX-12126-0011-R8a-SM-GI4WV
20-29 years, male
320.6
GTEX-1O9I2-0011-R8a-SM-F2TAX
50-59 years, male
320.0
GTEX-13SLX-0011-R8b-SM-5PNWZ
50-59 years, female
319.1
GTEX-1QMI2-0011-R8a-SM-F3429
60-69 years, male
316.3
GTEX-1F48J-0011-R8a-SM-9OSWW
50-59 years, female
316.1
GTEX-T6MN-0011-R8A-SM-32QP3
50-59 years, male
315.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K
50-59 years, female
314.5
GTEX-13G51-0011-R8b-SM-5LZZ4
60-69 years, male
311.9
GTEX-1KANB-0011-R8a-SM-F3K5N
50-59 years, male
310.6
GTEX-1GN1U-0011-R8a-SM-CL537
50-59 years, female
309.3
GTEX-NPJ8-0011-R8a-SM-2HMLG
40-49 years, male
309.0
GTEX-13OW6-0011-R8a-SM-5L3GF
50-59 years, male
303.1
GTEX-1GN2E-0011-R8a-SM-CE6RK
60-69 years, male
303.0
GTEX-17EVQ-0011-R8a-SM-7189T
70-79 years, male
302.4
GTEX-13NZA-0011-R8b-SM-5KM2Q
60-69 years, male
299.9
GTEX-YFC4-0011-R8a-SM-4SOK3
40-49 years, female
299.5
GTEX-1LVA9-0011-R8a-SM-F3K5G
50-59 years, male
298.6
GTEX-13CF2-0011-R8b-SM-5IJCX
60-69 years, male
297.9
GTEX-144GL-0011-R8a-SM-5Q5B1
50-59 years, male
297.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO
40-49 years, male
296.5
GTEX-1JN1M-0011-R8b-SM-F6485
60-69 years, female
293.6
GTEX-1MA7X-0011-R8a-SM-G9EQD
60-69 years, male
292.2
GTEX-1IDJH-0011-R8b-SM-ARZLL
70-79 years, male
291.2
GTEX-ZVZQ-0011-R8a-SM-51MR5
60-69 years, female
291.1
GTEX-1I1GS-0011-R8b-SM-CKZPE
60-69 years, male
290.2
GTEX-1RDX4-0011-R8a-SM-G8LLT
50-59 years, female
289.5
GTEX-1MCQQ-0011-R8b-SM-F341H
60-69 years, male
287.0
GTEX-11GS4-0011-R8b-SM-GI4XA
60-69 years, male
286.5
GTEX-13OVL-0011-R8a-SM-5L3HH
50-59 years, male
286.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG
60-69 years, female
284.9
GTEX-RNOR-0011-R8A-SM-EZ6MN
50-59 years, female
283.5
GTEX-1I1CD-0011-R8b-SM-CJI3X
60-69 years, female
283.0
GTEX-17EVP-0011-R8b-SM-7DUF9
40-49 years, male
282.1
GTEX-1B996-0011-R8b-SM-79OOS
60-69 years, male
282.0
GTEX-17F97-0011-R8a-SM-7DUET
50-59 years, male
280.4
GTEX-13X6J-0011-R8b-SM-5PNUA
50-59 years, male
279.9
GTEX-ZAB4-0011-R8b-SM-4SOKF
40-49 years, male
279.3
GTEX-12696-0011-R8a-SM-GINAP
60-69 years, male
278.5
GTEX-13SLW-0011-R8b-SM-5SI64
70-79 years, male
278.1
GTEX-1HBPH-0011-R8b-SM-CL556
40-49 years, female
278.0
GTEX-16NPV-0011-R8a-SM-7EPH8
50-59 years, female
276.5
GTEX-1I1HK-0011-R8b-SM-E8VN9
60-69 years, male
273.8
GTEX-X4XX-0011-R8B-SM-46MWM
60-69 years, male
273.1
GTEX-1LKK1-0011-R8a-SM-F341O
50-59 years, female
272.2
GTEX-132Q8-0011-R8b-SM-5DUWX
60-69 years, male
270.6
GTEX-14PJO-0011-R8a-SM-6AJAL
60-69 years, male
268.5
GTEX-1F52S-0011-R8a-SM-9OSXA
60-69 years, female
266.5
GTEX-1GZ4I-0011-R8b-SM-9WG76
50-59 years, male
266.2
GTEX-1BAJH-0011-R8a-SM-7MXUB
70-79 years, male
264.9
GTEX-14E7W-0011-R8b-SM-GQ1D6
70-79 years, male
264.3
GTEX-139TS-0011-R8a-SM-5J1NP
60-69 years, male
263.5
GTEX-1F6I4-0011-R8a-SM-9QEIA
60-69 years, male
262.2
GTEX-1IY9M-0011-R8a-SM-EYYWW
60-69 years, male
261.4
GTEX-NL4W-0011-R8a-SM-2I3G4
50-59 years, male
259.4
GTEX-1JMPZ-0011-R8b-SM-F341A
30-39 years, male
256.4
GTEX-14BIL-0011-R8b-SM-69LQK
50-59 years, male
253.9
GTEX-16Z82-0011-R8a-SM-7DUEX
60-69 years, male
253.0
GTEX-145LS-0011-R8b-SM-5PNXA
60-69 years, female
252.2
GTEX-1GF9W-0011-R8b-SM-9QEIR
60-69 years, male
252.2
GTEX-1RQED-0011-R8a-SM-G8LKO
60-69 years, male
248.9
GTEX-13FLV-0011-R8a-SM-5LZZE
50-59 years, male
248.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA
70-79 years, male
246.9
GTEX-1B8SF-0011-R8b-SM-7P8SX
60-69 years, male
243.6
GTEX-PWO3-0011-R8A-SM-2I5GD
60-69 years, female
241.5
GTEX-11ZTS-0011-R8a-SM-57WDI
60-69 years, female
238.9
GTEX-ZDXO-0011-R8a-SM-4WWD7
60-69 years, male
237.6
GTEX-16XZZ-0011-R8b-SM-7LT8S
60-69 years, male
237.2
GTEX-1KWVE-0011-R8a-SM-F3K4V
30-39 years, male
234.6
GTEX-ZXG5-0011-R8a-SM-57WD1
60-69 years, male
230.6
GTEX-13X6I-0011-R8a-SM-5PNZF
60-69 years, male
228.4
GTEX-12WSM-0011-R8a-SM-5DUWJ
60-69 years, male
226.0
GTEX-18465-0011-R8b-SM-7LG6O
50-59 years, male
225.4
GTEX-1JMQK-0011-R8a-SM-G8LMS
60-69 years, male
224.6
GTEX-1GZHY-0011-R8b-SM-9OSWK
50-59 years, female
224.4
GTEX-14PQA-0011-R8b-SM-6AJAB
50-59 years, female
223.8
GTEX-11WQC-0011-R8b-SM-57WCH
60-69 years, male
220.3
GTEX-1H1DG-0011-R8a-SM-CL54Z
70-79 years, male
219.8
GTEX-1B8SG-0011-R8b-SM-7IGNW
50-59 years, male
219.1
GTEX-13OVJ-0011-R8b-SM-5L3FS
50-59 years, female
218.9
GTEX-1F75A-0011-R8a-SM-CL539
50-59 years, male
211.6
GTEX-13NYS-0011-R8a-SM-5MR5H
60-69 years, male
211.1
GTEX-14LZ3-0011-R8b-SM-COH3M
60-69 years, female
209.9
GTEX-WVLH-0011-R8A-SM-3MJFC
50-59 years, male
208.9
GTEX-11ONC-0011-R8b-SM-5NQ87
60-69 years, male
206.1
GTEX-16GPK-0011-R8a-SM-79OMQ
60-69 years, male
206.1
GTEX-11H98-0011-R8a-SM-5NQ8V
50-59 years, male
205.5
GTEX-1HCVE-0011-R8a-SM-ARU7A
50-59 years, male
202.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ
60-69 years, male
202.4
GTEX-1CB4G-0011-R8b-SM-9WG7H
60-69 years, male
201.5
GTEX-13OW5-0011-R8a-SM-5L3GQ
60-69 years, male
201.1
GTEX-1E2YA-0011-R8a-SM-CKZNG
50-59 years, male
198.2
GTEX-13O3O-0011-R8b-SM-5LUAL
60-69 years, female
195.5
GTEX-1R46S-0011-R8a-SM-F3K4Q
60-69 years, female
195.2
GTEX-1R9K4-0011-R8b-SM-F649L
60-69 years, male
192.1
GTEX-ZVT3-0011-R8b-SM-57WDJ
60-69 years, female
191.7
GTEX-ZYY3-0011-R8a-SM-H7OHF
60-69 years, female
191.7
GTEX-1JJEA-0011-R8a-SM-F3419
60-69 years, male
191.1
GTEX-1POEN-0011-R8b-SM-F647O
30-39 years, female
189.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW
50-59 years, male
188.1
GTEX-WWYW-0011-R8A-SM-3NB3S
50-59 years, female
187.7
GTEX-13JVG-0011-R8a-SM-5KM3E
60-69 years, male
187.3
GTEX-1N5O9-0011-R8a-SM-F649C
60-69 years, male
185.7
GTEX-YJ89-0011-R8b-SM-4SOK8
60-69 years, male
185.2
GTEX-13PDP-0011-R8b-SM-5O9CS
60-69 years, male
183.2
GTEX-1QP6S-0011-R8a-SM-F649M
40-49 years, male
182.3
GTEX-1IKOH-0011-R8a-SM-A9SKG
60-69 years, female
182.2
GTEX-13OW8-0011-R8a-SM-5L3G5
60-69 years, male
175.0
GTEX-1PWST-0011-R8a-SM-F3K5P
70-79 years, male
172.4
GTEX-1CB4H-0011-R8b-SM-CJI26
60-69 years, female
170.1
GTEX-11TTK-0011-R8b-SM-DO111
60-69 years, female
168.7
GTEX-1PPGY-0011-R8a-SM-F649R
60-69 years, male
167.4
GTEX-11EI6-0011-R8a-SM-DO93M
60-69 years, male
162.9
GTEX-N7MS-0011-R8a-SM-2YUMK
60-69 years, male
162.0
GTEX-15G19-0011-R8b-SM-7KUL1
60-69 years, male
159.8
GTEX-15DCD-0011-R8b-SM-7KUEF
70-79 years, female
159.5
GTEX-OXRN-0011-R8A-SM-E9TI1
50-59 years, male
158.3
GTEX-1477Z-0011-R8b-SM-5S2RG
60-69 years, male
157.6
GTEX-QDT8-0011-R8A-SM-G8W63
30-39 years, female
156.4
GTEX-13QJC-0011-R8b-SM-5S2U6
60-69 years, female
153.5
GTEX-147F4-0011-R8b-SM-5S2UN
50-59 years, male
147.6
GTEX-13112-0011-R8b-SM-664OV
50-59 years, male
142.9
GTEX-11GSP-0011-R8b-SM-5NQ79
60-69 years, female
140.1
GTEX-1OJC4-0011-R8a-SM-F3K5B
50-59 years, female
136.8
GTEX-11WQK-0011-R8a-SM-5BC7C
50-59 years, male
134.8
GTEX-ZF28-0011-R8a-SM-4WWFW
60-69 years, male
130.6
GTEX-1H1CY-0011-R8b-SM-CJI31
60-69 years, female
129.6
GTEX-14753-0011-R8b-SM-5S2U1
60-69 years, male
129.0
GTEX-1C64N-0011-R8b-SM-7MGXE
50-59 years, male
126.9
GTEX-XMD1-0011-R8A-SM-4AT48
60-69 years, male
126.9
GTEX-1HBPI-0011-R8a-SM-A9G1S
50-59 years, male
125.5
GTEX-1CAV2-0011-R8a-SM-GRR24
40-49 years, female
125.2
GTEX-1RAZS-0011-R8a-SM-F2TBI
50-59 years, male
124.7
GTEX-1CB4J-0011-R8a-SM-9QEHU
60-69 years, male
123.2
GTEX-131XW-0011-R8a-SM-5DUWY
50-59 years, female
120.8
GTEX-11EMC-0011-R8b-SM-DO91Z
60-69 years, female
117.5
GTEX-X4XY-0011-R8A-SM-46MVC
60-69 years, male
112.3
GTEX-1445S-0011-R8a-SM-5PNWX
60-69 years, male
110.8
GTEX-12WSD-0011-R8b-SM-9QEGI
60-69 years, female
110.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT
50-59 years, male
109.2
GTEX-1GN1V-0011-R8a-SM-CKZNV
60-69 years, male
96.4
GTEX-1QEPI-0011-R8a-SM-G8LLI
60-69 years, female
96.3
GTEX-1JN6P-0011-R8a-SM-F6499
60-69 years, male
82.8
GTEX-1CAMQ-0011-R8a-SM-ARU85
40-49 years, male
82.2
GTEX-11ZU8-0011-R8b-SM-GHWOM
60-69 years, male
81.1
GTEX-1H23P-0011-R8b-SM-A9G1G
60-69 years, male
77.4
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HYPOTHALAMUS - Macaque RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
199.2
Macaque sample
Sample description
nTPM
Preoptic area nTPM: 199.2
Samples: 1
Max nTPM: 199.2
Min nTPM: 199.2
Sample A
199.2
HYPOTHALAMUS - Pig RNA-seqi
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
138.9
Pig sample
Sample description
nTPM
Hypothalamus nTPM: 138.9
Samples: 4
Max nTPM: 169.4
Min nTPM: 116.1
Sample A
Female
169.4
Sample B
Female
146.4
Sample C
Male
123.8
Sample D
Male
116.1
HYPOTHALAMUS - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
495.4
Mouse sample
Sample description
nTPM
Hypothalamus nTPM: 495.4
Samples: 4
Max nTPM: 518.6
Min nTPM: 454.8
Sample A
454.8
Sample B
518.6
Sample C
491.4
Sample D
516.7
HYPOTHALAMUS - Rat RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
162.3
Rat sample
Sample description
nTPM
Hypothalamus nTPM: 162.3
Samples: 4
Max nTPM: 175.1
Min nTPM: 145.9
Sample A
165.6
Sample A
145.9
Sample A
162.7
Sample A
175.1
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The Human Protein Atlas project is funded
