HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:974.2 nTPM
HPA Brain:677.0 nTPM
GTEx:974.2 nTPM
FANTOM5:826.0 Scaled Tags Per Million
Pig:387.7 nTPM
Mouse:397.0 nTPM
Allen mouse:2.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 677.0
Sample id Sample description nTPM
Hippocampus
nTPM: 677.0
2529 Female, age 94, left hemisphere 721.5
1898 Male, age 80, left hemisphere 693.8
1911 Female, age 85, right hemisphere 687.4
2148 Female, age 91, left hemisphere 683.6
1855 Male, age 76, left hemisphere 659.2
2621 Female, age 67, right hemisphere 616.8
Dentate gyrus
nTPM: 597.1
2530 Female, age 94, left hemisphere 928.9
2528 Male, age 74, both hemispheres 634.0
2010 Male, age 76, both hemispheres 560.0
2246 Female, age 85, both hemispheres 552.7
2531 Female, age 67, both hemispheres 511.2
1927 Female, age 91, both hemispheres 396.0
Entorhinal gyrus
nTPM: 561.4
2117 Female, age 91, right hemisphere 851.6
2686 Male, age 75, right hemisphere 620.1
2764 Male, age 80, right hemisphere 567.4
1938 Female, age 85, left hemisphere 506.1
1787 Male, age 76, left hemisphere 440.4
2613 Female, age 94, left hemisphere 382.9
Hippocampus, CA1
nTPM: 488.6
1873 Female, age 85, both hemispheres 651.2
2527 Male, age 74, both hemispheres 555.4
2082 Female, age 91, right hemisphere 526.9
2045 Male, age 76, both hemispheres 369.5
2749 Male, age 80, left hemisphere 339.7
Hippocampus, CA2
nTPM: 535.3
1963 Male, age 80, left hemisphere 672.8
2113 Female, age 91, right hemisphere 584.8
2249 Male, age 74, both hemispheres 580.9
2437 Female, age 94, left hemisphere 539.2
1940 Female, age 85, left hemisphere 477.7
1892 Male, age 76, both hemispheres 356.3
Hippocampus, CA3
nTPM: 463.0
1891 Female, age 85, both hemispheres 705.0
2861 Female, age 67, both hemispheres 532.0
2620 Female, age 94, left hemisphere 434.2
2436 Male, age 74, both hemispheres 408.4
1867 Male, age 76, both hemispheres 393.2
2137 Male, age 80, left hemisphere 305.1
Parahippocampal cortex
nTPM: 480.2
2692 Male, age 74, both hemispheres 633.7
2532 Female, age 72, left hemisphere 536.5
2018 Male, age 76, both hemispheres 522.0
2622 Female, age 67, right hemisphere 491.8
2245 Female, age 91, both hemispheres 488.3
1933 Female, age 85, both hemispheres 484.3
1990 Female, age 91, right hemisphere 464.6
1850 Male, age 80, both hemispheres 440.2
2250 Female, age 67, right hemisphere 412.2
2693 Female, age 94, both hemispheres 328.3
Perirhinal gyrus
nTPM: 356.3
1847 Female, age 91, left hemisphere 414.2
1794 Male, age 80, right hemisphere 389.4
1841 Female, age 85, right hemisphere 342.0
2521 Female, age 94, right hemisphere 325.0
2848 Male, age 76, right hemisphere 311.1
Subiculum
nTPM: 668.9
2042 Male, age 76, both hemispheres 789.3
2729 Female, age 91, right hemisphere 743.2
1901 Male, age 80, both hemispheres 677.7
2438 Female, age 94, left hemisphere 624.6
1977 Female, age 85, both hemispheres 593.0
2619 Male, age 74, both hemispheres 585.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 974.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 974.2
Samples: 255

Max nTPM: 3037.1
Min nTPM: 334.3
Std nTPM: 416.0
Median nTPM: 870.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3037.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2408.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2392.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2374.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2291.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 2279.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 2153.8
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 1995.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 1807.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1768.7
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 1768.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 826.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 826.0
FF:10153-102I9 76 years, female 985.4
FF:10169-103B7 60 years, female 666.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 387.7
Pig sample Sample description nTPM
Subiculum
nTPM: 202.5
Samples: 4

Max nTPM: 225.5
Min nTPM: 182.4
Sample A Female 214.5
Sample B Female 225.5
Sample C Male 182.4
Sample D Male 187.5
Dorsal hippocampus
nTPM: 387.7
Samples: 4

Max nTPM: 564.9
Min nTPM: 162.1
Sample A Female 528.1
Sample B Female 295.8
Sample C Male 564.9
Sample D Male 162.1
Entorhinal cortex
nTPM: 180.5
Samples: 4

Max nTPM: 228.2
Min nTPM: 137.5
Sample A Female 137.5
Sample B Female 228.2
Sample C Male 172.7
Sample D Male 183.4
Ventral hippocampus
nTPM: 292.5
Samples: 4

Max nTPM: 347.8
Min nTPM: 186.8
Sample A Female 290.1
Sample B Female 186.8
Sample C Male 347.8
Sample D Male 345.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 397.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 243.5
Samples: 4

Max nTPM: 312.6
Min nTPM: 151.3
Sample A Male 312.6
Sample B Male 240.6
Sample C Female 269.5
Sample D Female 151.3
Hippocampal formation
nTPM: 397.0
Samples: 4

Max nTPM: 490.4
Min nTPM: 352.1
Sample A Male 359.1
Sample B Male 352.1
Sample C Female 490.4
Sample D Female 386.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
71836842 Antisense, RP_051017_02_C05, Mouse strain C57BL/6J (56 days, male) 3.0
68196931 Antisense, RP_041116_01_F10, Mouse strain C57BL/6J (56 days, male) 1.0

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