HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:299.5 nTPM
HPA Brain:217.1 nTPM
GTEx:299.5 nTPM
FANTOM5:359.7 Scaled Tags Per Million
Pig:303.9 nTPM
Mouse:36.6 nTPM
Allen mouse:2.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001762Antibody CAB000080Antibody CAB058687
Glial cells LowMediumNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 217.1
Sample id Sample description nTPM
Hippocampus
nTPM: 208.4
2529 Female, age 94, left hemisphere 279.8
2621 Female, age 67, right hemisphere 242.9
1911 Female, age 85, right hemisphere 223.6
1898 Male, age 80, left hemisphere 186.2
1855 Male, age 76, left hemisphere 162.9
2148 Female, age 91, left hemisphere 154.7
Dentate gyrus
nTPM: 193.7
2010 Male, age 76, both hemispheres 297.7
2530 Female, age 94, left hemisphere 194.2
2528 Male, age 74, both hemispheres 188.9
2531 Female, age 67, both hemispheres 181.6
2246 Female, age 85, both hemispheres 172.9
1927 Female, age 91, both hemispheres 127.2
Entorhinal gyrus
nTPM: 181.1
2117 Female, age 91, right hemisphere 290.5
2686 Male, age 75, right hemisphere 206.2
1787 Male, age 76, left hemisphere 184.8
1938 Female, age 85, left hemisphere 173.6
2613 Female, age 94, left hemisphere 117.8
2764 Male, age 80, right hemisphere 113.5
Hippocampus, CA1
nTPM: 172.4
2082 Female, age 91, right hemisphere 228.0
2527 Male, age 74, both hemispheres 178.1
1873 Female, age 85, both hemispheres 177.1
2045 Male, age 76, both hemispheres 146.2
2749 Male, age 80, left hemisphere 132.7
Hippocampus, CA2
nTPM: 211.0
1940 Female, age 85, left hemisphere 287.2
2249 Male, age 74, both hemispheres 258.9
2113 Female, age 91, right hemisphere 211.7
2437 Female, age 94, left hemisphere 191.9
1963 Male, age 80, left hemisphere 163.8
1892 Male, age 76, both hemispheres 152.9
Hippocampus, CA3
nTPM: 217.1
2436 Male, age 74, both hemispheres 328.4
1867 Male, age 76, both hemispheres 268.4
2861 Female, age 67, both hemispheres 200.3
2137 Male, age 80, left hemisphere 187.0
1891 Female, age 85, both hemispheres 174.9
2620 Female, age 94, left hemisphere 143.6
Parahippocampal cortex
nTPM: 165.9
2018 Male, age 76, both hemispheres 202.4
1990 Female, age 91, right hemisphere 196.8
2250 Female, age 67, right hemisphere 183.9
2622 Female, age 67, right hemisphere 181.0
2245 Female, age 91, both hemispheres 180.0
2692 Male, age 74, both hemispheres 160.5
1933 Female, age 85, both hemispheres 156.7
2532 Female, age 72, left hemisphere 151.3
2693 Female, age 94, both hemispheres 126.9
1850 Male, age 80, both hemispheres 119.3
Perirhinal gyrus
nTPM: 158.6
1841 Female, age 85, right hemisphere 219.5
2521 Female, age 94, right hemisphere 190.8
1794 Male, age 80, right hemisphere 144.4
1847 Female, age 91, left hemisphere 133.4
2848 Male, age 76, right hemisphere 105.0
Subiculum
nTPM: 191.9
2042 Male, age 76, both hemispheres 264.9
2619 Male, age 74, both hemispheres 227.5
2438 Female, age 94, left hemisphere 179.8
2729 Female, age 91, right hemisphere 175.7
1977 Female, age 85, both hemispheres 152.9
1901 Male, age 80, both hemispheres 150.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 299.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 299.5
Samples: 255

Max nTPM: 1152.5
Min nTPM: 40.6
Std nTPM: 166.3
Median nTPM: 265.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1152.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1133.8
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 1077.8
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 974.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 863.3
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 820.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 704.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 701.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 682.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 654.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 653.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 359.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 359.7
FF:10153-102I9 76 years, female 530.3
FF:10169-103B7 60 years, female 189.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 303.9
Pig sample Sample description nTPM
Subiculum
nTPM: 303.4
Samples: 4

Max nTPM: 398.4
Min nTPM: 224.1
Sample A Female 290.1
Sample B Female 224.1
Sample C Male 300.8
Sample D Male 398.4
Dorsal hippocampus
nTPM: 266.7
Samples: 4

Max nTPM: 354.6
Min nTPM: 144.2
Sample A Female 332.3
Sample B Female 235.8
Sample C Male 354.6
Sample D Male 144.2
Entorhinal cortex
nTPM: 226.8
Samples: 4

Max nTPM: 335.8
Min nTPM: 97.8
Sample A Female 335.8
Sample B Female 223.8
Sample C Male 249.6
Sample D Male 97.8
Ventral hippocampus
nTPM: 303.9
Samples: 4

Max nTPM: 496.6
Min nTPM: 204.4
Sample A Female 267.3
Sample B Female 204.4
Sample C Male 496.6
Sample D Male 247.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 36.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 35.6
Min nTPM: 27.8
Sample A Male 35.6
Sample B Male 27.8
Sample C Female 33.6
Sample D Female 29.7
Hippocampal formation
nTPM: 36.6
Samples: 4

Max nTPM: 40.7
Min nTPM: 32.3
Sample A Male 32.3
Sample B Male 34.2
Sample C Female 39.2
Sample D Female 40.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
79677375 Antisense, RP_071218_02_C11, Mouse strain C57BL/6J (56 days, male) 3.0
79677371 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 2.9
1310 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 1.1
79907904 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 1.0
1309 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 0.4

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