HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:72.7 nTPM
HPA Brain:46.2 nTPM
GTEx:72.7 nTPM
FANTOM5:8.1 Scaled Tags Per Million
Mouse:2.6 nTPM
Allen mouse:0.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056316Antibody HPA075286
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 46.2
Sample id Sample description nTPM
Hippocampus
nTPM: 35.9
1911 Female, age 85, right hemisphere 43.8
2529 Female, age 94, left hemisphere 42.5
1855 Male, age 76, left hemisphere 34.9
2621 Female, age 67, right hemisphere 32.2
2148 Female, age 91, left hemisphere 31.2
1898 Male, age 80, left hemisphere 31.0
Dentate gyrus
nTPM: 34.2
2530 Female, age 94, left hemisphere 66.3
2010 Male, age 76, both hemispheres 38.2
2246 Female, age 85, both hemispheres 31.4
2528 Male, age 74, both hemispheres 26.8
2531 Female, age 67, both hemispheres 22.3
1927 Female, age 91, both hemispheres 20.1
Entorhinal gyrus
nTPM: 39.9
2117 Female, age 91, right hemisphere 60.7
2764 Male, age 80, right hemisphere 47.3
2686 Male, age 75, right hemisphere 39.1
2613 Female, age 94, left hemisphere 33.2
1938 Female, age 85, left hemisphere 30.2
1787 Male, age 76, left hemisphere 28.9
Hippocampus, CA1
nTPM: 29.7
2082 Female, age 91, right hemisphere 38.9
1873 Female, age 85, both hemispheres 34.2
2527 Male, age 74, both hemispheres 32.1
2749 Male, age 80, left hemisphere 22.3
2045 Male, age 76, both hemispheres 21.0
Hippocampus, CA2
nTPM: 36.1
1940 Female, age 85, left hemisphere 41.9
2437 Female, age 94, left hemisphere 40.4
1963 Male, age 80, left hemisphere 39.8
2249 Male, age 74, both hemispheres 38.6
2113 Female, age 91, right hemisphere 34.5
1892 Male, age 76, both hemispheres 21.3
Hippocampus, CA3
nTPM: 22.1
1891 Female, age 85, both hemispheres 42.9
1867 Male, age 76, both hemispheres 26.3
2436 Male, age 74, both hemispheres 19.7
2861 Female, age 67, both hemispheres 18.7
2137 Male, age 80, left hemisphere 13.9
2620 Female, age 94, left hemisphere 11.2
Parahippocampal cortex
nTPM: 29.6
2692 Male, age 74, both hemispheres 41.5
2018 Male, age 76, both hemispheres 40.6
2532 Female, age 72, left hemisphere 35.9
1990 Female, age 91, right hemisphere 31.6
1933 Female, age 85, both hemispheres 28.6
2245 Female, age 91, both hemispheres 28.2
1850 Male, age 80, both hemispheres 28.0
2693 Female, age 94, both hemispheres 22.1
2622 Female, age 67, right hemisphere 20.7
2250 Female, age 67, right hemisphere 18.5
Perirhinal gyrus
nTPM: 20.1
2521 Female, age 94, right hemisphere 27.6
1794 Male, age 80, right hemisphere 22.7
1847 Female, age 91, left hemisphere 18.7
2848 Male, age 76, right hemisphere 17.2
1841 Female, age 85, right hemisphere 14.1
Subiculum
nTPM: 46.2
2042 Male, age 76, both hemispheres 66.7
1901 Male, age 80, both hemispheres 53.0
2438 Female, age 94, left hemisphere 46.6
1977 Female, age 85, both hemispheres 39.0
2729 Female, age 91, right hemisphere 36.8
2619 Male, age 74, both hemispheres 35.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 72.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.7
Samples: 255

Max nTPM: 229.9
Min nTPM: 19.4
Std nTPM: 35.8
Median nTPM: 66.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 229.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 229.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 218.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 198.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 174.6
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 167.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 159.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 146.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 146.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 146.3
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 138.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 8.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.1
FF:10153-102I9 76 years, female 11.2
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 2.6
Min nTPM: 2.6
Sample A Male 2.6
Sample B Male 2.6
Sample C Female 2.6
Sample D Female 2.6
Hippocampal formation
nTPM: 1.6
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.0
Sample A Male 1.6
Sample B Male 1.6
Sample C Female 1.0
Sample D Female 2.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
70528545 Antisense, RP_050623_02_G12, Mouse strain C57BL/6J (56 days, male) 1.1
74750022 Antisense, RP_060220_05_E12, Mouse strain C57BL/6J (56 days, male) 0.5

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