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COL9A2
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  • TISSUE

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  • COL9A2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:53.2 nTPM
HPA Brain:70.9 nTPM
GTEx:53.2 nTPM
Mouse:3.9 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 16.4
1961 Female, age 42, unknown 16.6
2226 Male, age 75, left hemisphere 16.1
Dorsomedial nucleus
nTPM: 31.5
2017 Female, age 42, unknown 42.4
1989 Male, age 62, unknown 33.1
2041 Female, age 72, unknown 18.9
Lateral hypothalamic area
nTPM: 38.1
2228 Male, age 66, unknown 53.0
2412 Male, age 62, unknown 34.5
1791 Male, age 80, right hemisphere 33.0
2271 Male, age 75, both hemispheres 32.0
Mammillary body
nTPM: 70.9
1945 Male, age 80, right hemisphere 92.2
1834 Female, age 42, unknown 85.0
1948 Female, age 72, unknown 74.1
2413 Male, age 66, unknown 52.6
1923 Female, age 72, unknown 50.3
Paraventricular nucleus
nTPM: 60.2
2700 Male, age 62, unknown 60.2
Preoptic area
nTPM: 43.6
2414 Female, age 72, unknown 65.3
1861 Female, age 42, unknown 46.3
1907 Male, age 80, right hemisphere 19.1
Supraoptic nucleus
nTPM: 39.4
2043 Male, age 62, unknown 53.9
1894 Female, age 72, unknown 33.0
2835 Female, age 72, unknown 31.4
Ventromedial nucleus
nTPM: 19.5
1982 Female, age 72, unknown 20.1
1822 Female, age 42, unknown 19.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 53.2
Samples: 257

Max nTPM: 214.7
Min nTPM: 4.9
Std nTPM: 36.7
Median nTPM: 42.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 214.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 206.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 198.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 188.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 165.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 163.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 159.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 152.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 142.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 138.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 138.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 138.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 137.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 130.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 126.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 122.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 122.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 116.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 116.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 115.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 111.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 110.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 109.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 109.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 108.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 108.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 105.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 102.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 100.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 99.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 99.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 96.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 96.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 94.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 91.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 90.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 88.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 86.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 85.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 84.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 82.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 82.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 81.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 81.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 79.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 79.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 78.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 77.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 75.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 74.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 74.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 72.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 70.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 70.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 70.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 68.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 67.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 66.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 66.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 64.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 64.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 63.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 62.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 62.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 62.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 62.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 62.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 62.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 62.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 61.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 59.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 58.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 58.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 57.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 57.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 56.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 56.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 56.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 55.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 55.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 55.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 55.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 55.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 53.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 52.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 52.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 52.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 52.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 52.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 51.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 51.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 51.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 51.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 51.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 51.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 50.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 50.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 50.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 50.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 50.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 50.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 50.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 49.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 49.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 49.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 49.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 49.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 48.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 48.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 48.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 48.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 47.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 47.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 47.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 47.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 46.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 46.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 46.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 45.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 43.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 43.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 43.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 42.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 42.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 42.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 42.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 42.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 42.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 42.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 42.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 41.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 41.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 41.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 40.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 40.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 40.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 40.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 40.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 39.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 39.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 39.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 39.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 38.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 38.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 38.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 38.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 37.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 37.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 37.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 37.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 36.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 36.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 36.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 36.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 35.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 35.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 35.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 35.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 35.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 35.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 34.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 34.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 34.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 33.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 33.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 33.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 33.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 32.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 32.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 32.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 32.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 32.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 31.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 31.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 31.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 31.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 31.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 31.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 30.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 30.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 30.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 30.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 30.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 29.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 29.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 29.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 28.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 28.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 28.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 28.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 28.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 28.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 28.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 28.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 28.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 28.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 27.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 27.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 27.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 27.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 27.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 26.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 26.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 26.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 26.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 26.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 26.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 26.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 26.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 25.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 25.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 25.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 24.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 24.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 24.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 24.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 24.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 23.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 23.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 23.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 23.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 22.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 22.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 22.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 21.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 21.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 21.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 20.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 20.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 20.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 20.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 20.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 20.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 20.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 19.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 19.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 19.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 19.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 18.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 17.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 17.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 17.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 16.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 16.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 16.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 15.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 15.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 14.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 13.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 12.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 12.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 12.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 12.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 10.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 4.9
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 3.9
Samples: 4

Max nTPM: 5.1
Min nTPM: 2.8
Sample A Male 5.1
Sample B Male 3.2
Sample C Female 2.8
Sample D Female 4.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.4
70528545 Antisense, RP_050623_02_G12, Mouse strain C57BL/6J (56 days, male) 1.6
74750022 Antisense, RP_060220_05_E12, Mouse strain C57BL/6J (56 days, male) 1.3

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