HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:180.1 nTPM
HPA Brain:75.4 nTPM
GTEx:180.1 nTPM
FANTOM5:45.0 Scaled Tags Per Million
Mouse:65.7 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020952Antibody CAB013584
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 75.4
Sample id Sample description nTPM
Hippocampus
nTPM: 70.3
1898 Male, age 80, left hemisphere 87.8
2529 Female, age 94, left hemisphere 82.7
2148 Female, age 91, left hemisphere 65.2
1855 Male, age 76, left hemisphere 64.8
1911 Female, age 85, right hemisphere 61.8
2621 Female, age 67, right hemisphere 59.5
Dentate gyrus
nTPM: 62.3
2528 Male, age 74, both hemispheres 74.0
2530 Female, age 94, left hemisphere 70.8
2010 Male, age 76, both hemispheres 65.1
2246 Female, age 85, both hemispheres 62.2
1927 Female, age 91, both hemispheres 51.0
2531 Female, age 67, both hemispheres 50.7
Entorhinal gyrus
nTPM: 69.5
2117 Female, age 91, right hemisphere 82.4
1938 Female, age 85, left hemisphere 81.0
1787 Male, age 76, left hemisphere 73.9
2764 Male, age 80, right hemisphere 72.9
2686 Male, age 75, right hemisphere 54.1
2613 Female, age 94, left hemisphere 52.5
Hippocampus, CA1
nTPM: 69.5
2527 Male, age 74, both hemispheres 83.2
2749 Male, age 80, left hemisphere 77.6
2082 Female, age 91, right hemisphere 66.4
1873 Female, age 85, both hemispheres 61.3
2045 Male, age 76, both hemispheres 59.0
Hippocampus, CA2
nTPM: 66.9
2249 Male, age 74, both hemispheres 83.9
1963 Male, age 80, left hemisphere 70.5
2437 Female, age 94, left hemisphere 67.5
2113 Female, age 91, right hemisphere 64.8
1940 Female, age 85, left hemisphere 60.6
1892 Male, age 76, both hemispheres 54.3
Hippocampus, CA3
nTPM: 61.4
2436 Male, age 74, both hemispheres 88.0
1891 Female, age 85, both hemispheres 66.8
2137 Male, age 80, left hemisphere 63.5
1867 Male, age 76, both hemispheres 58.9
2861 Female, age 67, both hemispheres 53.5
2620 Female, age 94, left hemisphere 37.4
Parahippocampal cortex
nTPM: 65.2
1933 Female, age 85, both hemispheres 81.7
2250 Female, age 67, right hemisphere 76.5
1990 Female, age 91, right hemisphere 73.0
1850 Male, age 80, both hemispheres 69.4
2018 Male, age 76, both hemispheres 63.7
2245 Female, age 91, both hemispheres 63.6
2532 Female, age 72, left hemisphere 61.6
2692 Male, age 74, both hemispheres 61.2
2622 Female, age 67, right hemisphere 54.6
2693 Female, age 94, both hemispheres 46.5
Perirhinal gyrus
nTPM: 75.4
1847 Female, age 91, left hemisphere 93.1
1794 Male, age 80, right hemisphere 86.1
1841 Female, age 85, right hemisphere 76.1
2848 Male, age 76, right hemisphere 66.8
2521 Female, age 94, right hemisphere 55.1
Subiculum
nTPM: 68.3
1977 Female, age 85, both hemispheres 76.5
1901 Male, age 80, both hemispheres 72.6
2619 Male, age 74, both hemispheres 69.8
2438 Female, age 94, left hemisphere 67.6
2042 Male, age 76, both hemispheres 62.7
2729 Female, age 91, right hemisphere 60.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 180.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 180.1
Samples: 255

Max nTPM: 453.1
Min nTPM: 83.4
Std nTPM: 55.9
Median nTPM: 167.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 453.1
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 437.6
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 380.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 379.1
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 346.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 339.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 327.6
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 319.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 309.6
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 298.8
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 294.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 45.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.0
FF:10153-102I9 76 years, female 52.6
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 65.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 69.9
Min nTPM: 60.0
Sample A Male 63.8
Sample B Male 69.0
Sample C Female 69.9
Sample D Female 60.0
Hippocampal formation
nTPM: 62.0
Samples: 4

Max nTPM: 70.2
Min nTPM: 57.7
Sample A Male 70.2
Sample B Male 58.8
Sample C Female 57.7
Sample D Female 61.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68523195 Antisense, RP_050118_02_C09, Mouse strain C57BL/6J (56 days, male) 0.5

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