HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:78.6 nTPM
HPA Brain:361.7 nTPM
GTEx:78.6 nTPM
FANTOM5:249.9 Scaled Tags Per Million
Pig:252.9 nTPM
Mouse:130.1 nTPM
Allen mouse:1.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051816Antibody HPA054745Antibody CAB033558
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 361.7
Sample id Sample description nTPM
Hippocampus
nTPM: 249.7
2529 Female, age 94, left hemisphere 330.9
2621 Female, age 67, right hemisphere 302.3
1911 Female, age 85, right hemisphere 247.7
1898 Male, age 80, left hemisphere 239.1
2148 Female, age 91, left hemisphere 206.1
1855 Male, age 76, left hemisphere 171.8
Dentate gyrus
nTPM: 284.5
2530 Female, age 94, left hemisphere 760.7
2531 Female, age 67, both hemispheres 280.0
2010 Male, age 76, both hemispheres 229.9
2246 Female, age 85, both hemispheres 200.4
2528 Male, age 74, both hemispheres 125.5
1927 Female, age 91, both hemispheres 110.6
Entorhinal gyrus
nTPM: 318.6
2686 Male, age 75, right hemisphere 531.3
2117 Female, age 91, right hemisphere 460.9
2764 Male, age 80, right hemisphere 305.1
2613 Female, age 94, left hemisphere 275.8
1938 Female, age 85, left hemisphere 205.9
1787 Male, age 76, left hemisphere 132.6
Hippocampus, CA1
nTPM: 160.1
2082 Female, age 91, right hemisphere 211.2
2527 Male, age 74, both hemispheres 195.6
1873 Female, age 85, both hemispheres 172.3
2749 Male, age 80, left hemisphere 163.8
2045 Male, age 76, both hemispheres 57.7
Hippocampus, CA2
nTPM: 250.8
1963 Male, age 80, left hemisphere 435.2
2437 Female, age 94, left hemisphere 342.1
1940 Female, age 85, left hemisphere 229.9
2113 Female, age 91, right hemisphere 219.5
2249 Male, age 74, both hemispheres 167.2
1892 Male, age 76, both hemispheres 110.8
Hippocampus, CA3
nTPM: 161.2
1891 Female, age 85, both hemispheres 291.6
2861 Female, age 67, both hemispheres 225.7
1867 Male, age 76, both hemispheres 166.0
2620 Female, age 94, left hemisphere 97.5
2137 Male, age 80, left hemisphere 96.0
2436 Male, age 74, both hemispheres 90.5
Parahippocampal cortex
nTPM: 229.5
2532 Female, age 72, left hemisphere 388.2
2692 Male, age 74, both hemispheres 367.1
2622 Female, age 67, right hemisphere 280.2
1990 Female, age 91, right hemisphere 235.5
2245 Female, age 91, both hemispheres 230.1
1850 Male, age 80, both hemispheres 207.1
2018 Male, age 76, both hemispheres 178.2
1933 Female, age 85, both hemispheres 169.7
2693 Female, age 94, both hemispheres 129.8
2250 Female, age 67, right hemisphere 108.9
Perirhinal gyrus
nTPM: 107.1
1847 Female, age 91, left hemisphere 121.7
2848 Male, age 76, right hemisphere 118.8
1794 Male, age 80, right hemisphere 113.8
2521 Female, age 94, right hemisphere 91.7
1841 Female, age 85, right hemisphere 89.4
Subiculum
nTPM: 361.7
2438 Female, age 94, left hemisphere 547.9
2042 Male, age 76, both hemispheres 467.2
1901 Male, age 80, both hemispheres 426.0
1977 Female, age 85, both hemispheres 311.2
2619 Male, age 74, both hemispheres 214.7
2729 Female, age 91, right hemisphere 203.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 78.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.6
Samples: 255

Max nTPM: 343.2
Min nTPM: 10.8
Std nTPM: 53.0
Median nTPM: 63.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 343.2
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 338.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 336.1
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 279.0
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 216.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 214.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 212.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 211.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 209.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 208.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 200.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 249.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 249.9
FF:10153-102I9 76 years, female 258.9
FF:10169-103B7 60 years, female 240.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 252.9
Pig sample Sample description nTPM
Subiculum
nTPM: 88.5
Samples: 4

Max nTPM: 118.3
Min nTPM: 68.4
Sample A Female 118.3
Sample B Female 90.8
Sample C Male 76.4
Sample D Male 68.4
Dorsal hippocampus
nTPM: 252.9
Samples: 4

Max nTPM: 440.7
Min nTPM: 70.5
Sample A Female 440.7
Sample B Female 158.2
Sample C Male 342.3
Sample D Male 70.5
Entorhinal cortex
nTPM: 72.2
Samples: 4

Max nTPM: 110.6
Min nTPM: 49.7
Sample A Female 49.7
Sample B Female 110.6
Sample C Male 54.4
Sample D Male 74.2
Ventral hippocampus
nTPM: 149.3
Samples: 4

Max nTPM: 200.1
Min nTPM: 77.6
Sample A Female 179.9
Sample B Female 77.6
Sample C Male 139.6
Sample D Male 200.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 130.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.2
Samples: 4

Max nTPM: 101.8
Min nTPM: 30.8
Sample A Male 101.8
Sample B Male 76.7
Sample C Female 71.5
Sample D Female 30.8
Hippocampal formation
nTPM: 130.2
Samples: 4

Max nTPM: 162.5
Min nTPM: 117.5
Sample A Male 120.4
Sample B Male 120.2
Sample C Female 162.5
Sample D Female 117.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
77371831 Antisense, RP_070116_02_E08, Mouse strain C57BL/6J (56 days, male) 1.6

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