HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:80.8 nTPM
HPA Brain:117.3 nTPM
GTEx:80.8 nTPM
FANTOM5:140.8 Scaled Tags Per Million
Mouse:14.0 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073195
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 117.3
Sample id Sample description nTPM
Hippocampus
nTPM: 85.3
1911 Female, age 85, right hemisphere 106.1
2621 Female, age 67, right hemisphere 89.9
2148 Female, age 91, left hemisphere 88.5
2529 Female, age 94, left hemisphere 86.7
1898 Male, age 80, left hemisphere 71.0
1855 Male, age 76, left hemisphere 69.7
Dentate gyrus
nTPM: 91.6
2530 Female, age 94, left hemisphere 116.4
2531 Female, age 67, both hemispheres 107.2
2010 Male, age 76, both hemispheres 94.6
2528 Male, age 74, both hemispheres 84.6
2246 Female, age 85, both hemispheres 82.0
1927 Female, age 91, both hemispheres 64.9
Entorhinal gyrus
nTPM: 83.4
2117 Female, age 91, right hemisphere 136.2
2764 Male, age 80, right hemisphere 97.9
2686 Male, age 75, right hemisphere 76.4
1938 Female, age 85, left hemisphere 69.9
2613 Female, age 94, left hemisphere 65.3
1787 Male, age 76, left hemisphere 54.9
Hippocampus, CA1
nTPM: 76.4
2045 Male, age 76, both hemispheres 88.5
1873 Female, age 85, both hemispheres 87.4
2082 Female, age 91, right hemisphere 81.2
2527 Male, age 74, both hemispheres 74.8
2749 Male, age 80, left hemisphere 49.8
Hippocampus, CA2
nTPM: 86.7
1963 Male, age 80, left hemisphere 126.9
2249 Male, age 74, both hemispheres 96.5
2113 Female, age 91, right hemisphere 84.5
1940 Female, age 85, left hemisphere 81.8
2437 Female, age 94, left hemisphere 78.8
1892 Male, age 76, both hemispheres 51.7
Hippocampus, CA3
nTPM: 78.3
1891 Female, age 85, both hemispheres 143.3
1867 Male, age 76, both hemispheres 85.6
2436 Male, age 74, both hemispheres 82.8
2861 Female, age 67, both hemispheres 57.2
2620 Female, age 94, left hemisphere 55.8
2137 Male, age 80, left hemisphere 44.9
Parahippocampal cortex
nTPM: 66.8
2692 Male, age 74, both hemispheres 98.2
1990 Female, age 91, right hemisphere 89.6
2532 Female, age 72, left hemisphere 89.5
2018 Male, age 76, both hemispheres 78.4
1850 Male, age 80, both hemispheres 67.7
2245 Female, age 91, both hemispheres 66.1
1933 Female, age 85, both hemispheres 65.2
2693 Female, age 94, both hemispheres 42.9
2250 Female, age 67, right hemisphere 36.5
2622 Female, age 67, right hemisphere 34.3
Perirhinal gyrus
nTPM: 40.9
2521 Female, age 94, right hemisphere 49.4
2848 Male, age 76, right hemisphere 44.9
1794 Male, age 80, right hemisphere 40.7
1847 Female, age 91, left hemisphere 37.5
1841 Female, age 85, right hemisphere 32.1
Subiculum
nTPM: 117.3
2042 Male, age 76, both hemispheres 170.2
1901 Male, age 80, both hemispheres 145.8
1977 Female, age 85, both hemispheres 115.7
2438 Female, age 94, left hemisphere 102.2
2619 Male, age 74, both hemispheres 86.4
2729 Female, age 91, right hemisphere 83.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 80.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.8
Samples: 255

Max nTPM: 331.0
Min nTPM: 14.2
Std nTPM: 48.9
Median nTPM: 66.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 331.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 305.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 258.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 226.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 223.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 221.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 190.8
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 188.4
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 184.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 179.7
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 178.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 140.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 140.8
FF:10153-102I9 76 years, female 147.7
FF:10169-103B7 60 years, female 133.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 11.6
Min nTPM: 7.3
Sample A Male 9.7
Sample B Male 8.3
Sample C Female 11.6
Sample D Female 7.3
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 15.7
Min nTPM: 12.4
Sample A Male 12.4
Sample B Male 14.1
Sample C Female 13.7
Sample D Female 15.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68445107 Antisense, RP_050111_02_G09, Mouse strain C57BL/6J (56 days, male) 0.4
71015800 Antisense, RP_050725_02_G11, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo