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FAM107B
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  • SUMMARY

  • TISSUE

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  • FAM107B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:46.8 nTPM
HPA Brain:152.9 nTPM
GTEx:46.8 nTPM
Mouse:21.5 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 36.6
2226 Male, age 75, left hemisphere 43.9
1961 Female, age 42, unknown 29.4
Dorsomedial nucleus
nTPM: 62.5
2017 Female, age 42, unknown 91.2
1989 Male, age 62, unknown 56.0
2041 Female, age 72, unknown 40.4
Lateral hypothalamic area
nTPM: 91.2
2228 Male, age 66, unknown 130.8
2271 Male, age 75, both hemispheres 98.1
2412 Male, age 62, unknown 69.6
1791 Male, age 80, right hemisphere 66.2
Mammillary body
nTPM: 146.4
1945 Male, age 80, right hemisphere 187.1
1948 Female, age 72, unknown 169.3
1834 Female, age 42, unknown 160.5
1923 Female, age 72, unknown 108.0
2413 Male, age 66, unknown 107.2
Paraventricular nucleus
nTPM: 152.9
2700 Male, age 62, unknown 152.9
Preoptic area
nTPM: 96.8
2414 Female, age 72, unknown 173.6
1861 Female, age 42, unknown 87.0
1907 Male, age 80, right hemisphere 29.9
Supraoptic nucleus
nTPM: 97.8
2043 Male, age 62, unknown 131.0
1894 Female, age 72, unknown 88.0
2835 Female, age 72, unknown 74.5
Ventromedial nucleus
nTPM: 27.7
1822 Female, age 42, unknown 30.6
1982 Female, age 72, unknown 24.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 46.8
Samples: 257

Max nTPM: 240.5
Min nTPM: 9.4
Std nTPM: 36.3
Median nTPM: 32.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 240.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 198.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 186.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 169.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 165.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 158.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 153.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 136.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 136.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 136.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 131.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 128.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 125.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 120.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 109.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 109.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 105.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 105.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 104.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 103.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 97.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 97.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 97.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 95.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 95.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 94.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 93.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 93.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 90.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 89.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 89.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 89.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 89.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 85.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 85.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 83.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 81.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 81.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 80.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 80.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 78.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 77.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 76.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 73.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 73.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 72.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 70.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 70.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 69.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 69.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 69.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 68.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 66.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 65.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 65.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 64.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 64.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 64.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 62.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 62.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 62.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 61.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 60.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 60.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 60.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 59.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 58.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 58.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 57.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 56.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 56.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 55.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 55.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 55.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 54.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 54.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 53.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 53.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 52.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 51.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 51.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 51.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 51.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 50.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 50.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 49.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 48.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 48.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 48.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 47.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 46.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 46.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 45.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 45.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 45.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 44.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 44.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 44.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 43.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 43.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 42.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 42.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 42.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 42.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 41.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 41.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 41.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 40.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 40.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 39.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 39.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 39.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 38.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 38.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 36.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 35.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 35.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 35.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 34.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 34.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 34.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 33.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 33.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 32.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 32.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 32.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 32.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 32.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 32.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 32.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 32.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 32.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 31.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 31.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 31.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 31.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 30.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 30.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 30.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 30.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 29.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 29.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 29.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 29.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 29.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 29.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 29.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 28.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 28.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 28.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 28.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 27.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 27.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 27.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 27.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 27.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 27.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 27.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 26.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 26.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 26.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 26.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 26.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 26.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 25.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 25.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 25.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 25.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 25.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 24.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 24.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 24.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 24.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 24.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 24.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 24.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 23.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 23.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 23.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 23.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 23.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 23.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 22.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 22.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 22.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 22.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 22.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 22.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 22.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 22.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 22.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 22.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 22.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 21.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 21.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 21.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 21.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 21.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 21.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 21.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 21.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 21.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 21.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 21.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 21.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 20.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 19.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 19.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 19.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 19.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 19.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 19.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 19.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 18.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 18.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 18.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 18.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 18.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 18.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 18.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 17.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 17.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 17.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 17.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 17.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 17.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 17.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 17.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 16.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 16.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 16.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 16.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 16.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 16.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 15.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 15.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 15.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 15.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 15.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 15.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 14.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 14.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 14.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 14.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 14.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 13.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 13.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 13.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 13.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 13.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 12.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 11.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 11.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 11.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 9.4
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 21.5
Samples: 4

Max nTPM: 29.0
Min nTPM: 15.3
Sample A Male 25.2
Sample B Male 16.4
Sample C Female 29.0
Sample D Female 15.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
68445107 Antisense, RP_050111_02_G09, Mouse strain C57BL/6J (56 days, male) 0.2
71015800 Antisense, RP_050725_02_G11, Mouse strain C57BL/6J (56 days, male) 0.1

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