PKM
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • PKM
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:477.0 nTPM
GTEx:515.3 nTPM
FANTOM5:1035.8 Scaled Tags Per Million
Macaque:412.8 nTPM
Pig:891.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

477.0
Sample id Sample description nTPM
Putamen
nTPM: 477.0
2482 Female, age 94, left hemisphere 591.3
1838 Male, age 80, right hemisphere 501.4
1937 Female, age 91, right hemisphere 495.7
2647 Male, age 75, left hemisphere 483.9
2466 Female, age 79, unknown 465.0
1829 Male, age 74, unknown 440.2
2489 Female, age 72, unknown 361.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

515.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 515.3
Samples: 254

Max nTPM: 915.0
Min nTPM: 203.2
Std nTPM: 100.3
Median nTPM: 503.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 915.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 891.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 840.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 793.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 786.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 783.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 759.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 743.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 730.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 713.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 696.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 689.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 685.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 675.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 663.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 655.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 654.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 653.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 641.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 640.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 635.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 635.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 634.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 632.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 628.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 625.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 624.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 624.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 622.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 620.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 617.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 611.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 610.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 609.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 607.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 605.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 603.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 602.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 602.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 601.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 600.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 599.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 599.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 597.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 597.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 596.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 596.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 594.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 593.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 593.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 590.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 587.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 581.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 580.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 580.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 577.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 575.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 575.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 571.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 570.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 567.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 566.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 566.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 566.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 565.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 565.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 564.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 564.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 563.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 562.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 561.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 559.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 559.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 559.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 558.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 558.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 558.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 558.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 556.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 555.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 555.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 555.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 554.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 553.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 553.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 550.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 550.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 550.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 549.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 549.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 548.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 548.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 547.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 545.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 544.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 544.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 543.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 542.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 542.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 540.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 536.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 536.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 536.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 535.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 529.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 528.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 526.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 522.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 521.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 517.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 517.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 517.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 516.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 516.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 515.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 515.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 515.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 515.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 514.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 513.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 513.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 510.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 509.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 509.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 506.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 505.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 503.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 502.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 502.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 502.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 501.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 501.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 501.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 499.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 499.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 498.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 496.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 496.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 496.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 494.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 493.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 492.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 492.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 490.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 489.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 489.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 488.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 488.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 486.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 486.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 485.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 484.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 484.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 483.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 482.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 482.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 481.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 481.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 481.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 480.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 480.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 478.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 476.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 476.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 476.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 476.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 475.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 475.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 475.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 473.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 472.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 472.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 471.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 471.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 470.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 469.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 468.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 468.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 466.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 465.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 465.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 464.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 464.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 463.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 462.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 462.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 461.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 456.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 453.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 452.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 452.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 450.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 450.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 450.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 448.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 448.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 447.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 447.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 446.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 443.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 442.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 441.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 441.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 439.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 438.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 437.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 436.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 435.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 434.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 433.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 432.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 432.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 431.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 430.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 428.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 425.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 424.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 424.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 423.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 420.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 420.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 419.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 418.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 417.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 414.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 411.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 411.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 409.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 408.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 408.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 407.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 404.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 404.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 401.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 395.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 389.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 389.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 385.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 384.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 381.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 379.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 377.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 374.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 367.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 357.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 334.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 333.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 323.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 321.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 290.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 283.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 247.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 244.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 203.2
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1035.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1035.8
FF:10176-103C5 60 years, female 1035.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

412.8
Macaque sample Sample description nTPM
Putamen
nTPM: 412.8
Samples: 2

Max nTPM: 414.2
Min nTPM: 411.3
Sample A 411.3
Sample B 414.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

891.7
Pig sample Sample description nTPM
Putamen
nTPM: 891.7
Samples: 3

Max nTPM: 1110.7
Min nTPM: 691.8
Sample B Female 691.8
Sample C Male 1110.7
Sample D Male 872.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.