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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:62.0 nTPM
HPA Brain:71.2 nTPM
GTEx:62.0 nTPM
Pig:40.1 nTPM
Mouse:106.0 nTPM
Allen mouse:11.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 38.8
1961 Female, age 42, unknown 40.5
2226 Male, age 75, left hemisphere 37.1
Dorsomedial nucleus
nTPM: 48.0
1989 Male, age 62, unknown 59.7
2017 Female, age 42, unknown 48.2
2041 Female, age 72, unknown 36.1
Lateral hypothalamic area
nTPM: 71.2
2228 Male, age 66, unknown 104.6
2271 Male, age 75, both hemispheres 77.8
1791 Male, age 80, right hemisphere 59.1
2412 Male, age 62, unknown 43.3
Mammillary body
nTPM: 54.8
1948 Female, age 72, unknown 59.1
2413 Male, age 66, unknown 58.0
1834 Female, age 42, unknown 57.8
1923 Female, age 72, unknown 52.5
1945 Male, age 80, right hemisphere 46.6
Paraventricular nucleus
nTPM: 66.9
2700 Male, age 62, unknown 66.9
Preoptic area
nTPM: 55.6
2414 Female, age 72, unknown 61.4
1861 Female, age 42, unknown 56.6
1907 Male, age 80, right hemisphere 48.7
Supraoptic nucleus
nTPM: 47.8
2835 Female, age 72, unknown 60.0
2043 Male, age 62, unknown 47.6
1894 Female, age 72, unknown 35.7
Ventromedial nucleus
nTPM: 43.4
1982 Female, age 72, unknown 52.0
1822 Female, age 42, unknown 34.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 62.0
Samples: 257

Max nTPM: 123.4
Min nTPM: 18.8
Std nTPM: 18.1
Median nTPM: 61.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 123.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 115.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 107.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 106.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 106.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 105.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 102.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 102.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 101.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 100.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 99.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 98.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 97.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 96.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 95.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 93.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 91.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 90.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 89.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 89.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 87.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 86.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 86.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 86.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 85.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 85.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 84.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 84.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 84.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 83.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 83.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 83.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 83.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 82.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 82.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 81.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 81.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 80.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 79.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 79.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 79.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 78.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 77.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 77.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 77.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 77.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 76.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 76.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 76.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 76.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 76.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 75.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 75.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 75.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 74.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 74.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 73.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 73.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 73.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 72.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 72.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 72.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 72.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 71.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 71.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 71.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 71.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 70.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 70.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 70.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 70.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 70.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 70.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 70.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 69.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 69.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 69.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 69.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 69.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 69.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 69.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 69.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 69.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 69.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 68.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 68.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 68.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 68.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 68.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 67.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 67.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 67.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 67.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 67.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 67.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 67.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 67.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 66.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 66.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 66.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 66.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 66.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 66.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 65.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 65.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 65.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 65.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 65.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 64.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 64.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 64.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 64.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 63.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 63.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 63.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 63.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 62.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 62.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 62.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 62.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 62.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 62.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 62.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 61.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 61.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 61.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 61.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 61.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 61.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 61.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 61.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 61.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 60.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 60.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 60.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 60.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 60.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 60.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 60.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 60.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 59.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 59.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 59.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 59.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 59.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 59.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 59.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 58.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 58.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 58.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 58.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 58.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 58.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 58.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 57.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 57.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 57.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 57.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 57.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 56.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 56.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 56.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 56.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 56.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 56.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 56.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 55.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 55.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 55.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 55.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 55.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 54.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 54.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 54.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 54.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 54.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 54.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 53.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 53.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 52.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 52.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 52.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 51.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 51.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 50.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 50.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 50.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 50.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 49.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 49.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 48.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 47.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 47.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 47.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 46.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 46.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 46.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 46.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 46.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 46.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 46.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 45.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 45.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 45.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 45.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 45.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 45.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 45.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 44.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 44.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 43.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 43.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 43.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 42.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 42.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 42.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 42.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 42.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 41.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 41.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 41.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 41.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 41.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 40.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 40.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 40.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 39.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 39.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 39.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 39.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 38.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 38.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 38.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 37.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 37.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 37.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 36.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 36.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 36.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 36.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 36.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 36.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 35.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 35.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 35.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 34.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 34.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 34.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 33.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 32.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 32.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 26.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 25.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 25.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 23.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 18.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 40.1
Samples: 4

Max nTPM: 52.1
Min nTPM: 31.9
Sample A Female 52.1
Sample B Female 37.7
Sample C Male 38.5
Sample D Male 31.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 106.0
Samples: 4

Max nTPM: 113.9
Min nTPM: 96.6
Sample A Male 109.5
Sample B Male 113.9
Sample C Female 103.9
Sample D Female 96.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.5
76081947 Antisense, RP_060626_01_B05, Mouse strain C57BL/6J (56 days, male) 11.5

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