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  • PFN2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:176.6 nTPM
HPA Brain:257.7 nTPM
GTEx:176.6 nTPM
Pig:318.7 nTPM
Mouse:399.4 nTPM
Allen mouse:10.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

257.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 206.4
2226 Male, age 75, left hemisphere 233.1
1961 Female, age 42, unknown 179.8
Dorsomedial nucleus
nTPM: 169.7
2041 Female, age 72, unknown 183.2
2017 Female, age 42, unknown 167.9
1989 Male, age 62, unknown 157.9
Lateral hypothalamic area
nTPM: 257.7
2228 Male, age 66, unknown 301.6
2271 Male, age 75, both hemispheres 272.6
1791 Male, age 80, right hemisphere 256.8
2412 Male, age 62, unknown 199.6
Mammillary body
nTPM: 171.6
1923 Female, age 72, unknown 217.5
1948 Female, age 72, unknown 172.1
1945 Male, age 80, right hemisphere 167.4
1834 Female, age 42, unknown 154.4
2413 Male, age 66, unknown 146.9
Paraventricular nucleus
nTPM: 192.1
2700 Male, age 62, unknown 192.1
Preoptic area
nTPM: 196.9
1907 Male, age 80, right hemisphere 237.3
1861 Female, age 42, unknown 187.1
2414 Female, age 72, unknown 166.3
Supraoptic nucleus
nTPM: 247.2
1894 Female, age 72, unknown 260.5
2835 Female, age 72, unknown 251.4
2043 Male, age 62, unknown 229.6
Ventromedial nucleus
nTPM: 212.5
1982 Female, age 72, unknown 238.9
1822 Female, age 42, unknown 186.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 176.6
Samples: 257

Max nTPM: 395.5
Min nTPM: 92.1
Std nTPM: 48.0
Median nTPM: 169.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 395.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 382.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 342.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 311.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 276.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 276.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 274.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 273.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 269.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 269.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 267.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 262.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 260.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 257.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 255.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 254.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 246.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 246.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 245.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 243.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 241.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 240.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 240.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 237.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 237.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 235.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 233.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 232.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 232.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 231.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 229.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 228.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 228.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 228.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 228.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 228.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 227.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 225.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 222.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 222.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 221.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 221.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 219.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 218.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 217.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 216.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 214.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 213.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 213.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 212.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 212.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 210.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 210.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 209.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 209.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 208.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 208.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 207.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 207.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 207.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 206.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 206.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 206.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 206.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 204.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 204.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 203.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 203.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 203.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 201.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 201.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 201.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 201.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 200.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 200.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 200.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 199.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 199.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 198.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 197.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 197.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 197.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 197.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 197.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 197.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 197.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 196.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 196.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 195.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 195.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 195.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 192.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 192.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 192.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 190.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 189.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 189.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 189.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 189.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 188.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 186.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 185.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 185.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 185.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 185.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 183.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 182.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 182.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 182.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 181.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 180.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 180.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 179.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 177.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 177.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 176.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 176.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 176.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 175.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 175.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 173.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 172.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 172.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 172.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 171.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 170.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 170.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 169.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 169.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 168.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 168.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 168.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 168.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 168.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 167.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 165.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 165.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 165.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 164.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 164.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 163.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 163.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 163.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 163.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 163.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 163.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 162.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 162.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 160.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 160.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 159.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 159.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 158.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 157.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 157.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 156.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 156.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 156.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 155.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 155.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 154.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 154.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 154.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 154.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 153.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 153.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 153.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 152.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 152.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 152.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 152.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 152.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 151.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 150.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 150.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 150.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 149.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 149.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 148.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 148.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 147.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 147.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 147.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 147.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 146.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 146.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 146.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 145.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 145.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 144.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 143.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 143.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 143.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 141.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 141.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 139.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 138.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 138.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 138.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 138.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 137.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 137.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 137.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 136.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 136.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 135.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 135.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 135.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 135.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 134.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 134.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 134.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 132.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 132.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 132.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 132.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 130.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 129.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 129.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 128.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 127.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 127.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 126.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 126.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 125.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 125.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 124.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 123.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 122.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 121.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 121.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 120.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 120.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 120.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 119.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 119.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 118.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 118.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 117.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 116.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 115.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 111.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 108.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 105.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 104.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 104.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 104.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 103.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 103.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 102.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 101.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 100.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 96.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 94.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 93.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 92.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 92.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

318.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 318.7
Samples: 4

Max nTPM: 433.1
Min nTPM: 249.3
Sample A Female 433.1
Sample B Female 315.8
Sample C Male 276.4
Sample D Male 249.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

399.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 399.4
Samples: 4

Max nTPM: 422.7
Min nTPM: 380.5
Sample A Male 380.5
Sample B Male 422.7
Sample C Female 413.3
Sample D Female 381.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.7
1262 Antisense, RP_040324_01_F06, Mouse strain C57BL/6J (56 days, male) 10.7
1261 Antisense, RP_040324_01_F06, Mouse strain C57BL/6J (56 days, male) 8.7

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