HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:48.9 nTPM
HPA Brain:81.7 nTPM
GTEx:48.9 nTPM
FANTOM5:59.9 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:103.0 nTPM
Allen mouse:7.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029318Antibody HPA064737
Glial cells Not detectedLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 81.7
Sample id Sample description nTPM
Hippocampus
nTPM: 78.0
1898 Male, age 80, left hemisphere 102.1
2621 Female, age 67, right hemisphere 86.1
1855 Male, age 76, left hemisphere 74.8
2148 Female, age 91, left hemisphere 73.2
2529 Female, age 94, left hemisphere 68.5
1911 Female, age 85, right hemisphere 63.0
Dentate gyrus
nTPM: 79.0
1927 Female, age 91, both hemispheres 126.7
2010 Male, age 76, both hemispheres 87.4
2531 Female, age 67, both hemispheres 67.9
2246 Female, age 85, both hemispheres 64.7
2528 Male, age 74, both hemispheres 64.7
2530 Female, age 94, left hemisphere 62.9
Entorhinal gyrus
nTPM: 64.5
1938 Female, age 85, left hemisphere 76.0
2686 Male, age 75, right hemisphere 70.4
2613 Female, age 94, left hemisphere 64.3
2764 Male, age 80, right hemisphere 63.1
1787 Male, age 76, left hemisphere 62.6
2117 Female, age 91, right hemisphere 50.3
Hippocampus, CA1
nTPM: 81.7
2749 Male, age 80, left hemisphere 132.1
1873 Female, age 85, both hemispheres 100.0
2527 Male, age 74, both hemispheres 66.4
2045 Male, age 76, both hemispheres 57.2
2082 Female, age 91, right hemisphere 52.7
Hippocampus, CA2
nTPM: 75.2
1963 Male, age 80, left hemisphere 109.5
1892 Male, age 76, both hemispheres 107.5
2249 Male, age 74, both hemispheres 67.8
2437 Female, age 94, left hemisphere 60.7
2113 Female, age 91, right hemisphere 53.3
1940 Female, age 85, left hemisphere 52.4
Hippocampus, CA3
nTPM: 73.2
2137 Male, age 80, left hemisphere 94.4
1867 Male, age 76, both hemispheres 76.8
2861 Female, age 67, both hemispheres 73.8
2620 Female, age 94, left hemisphere 69.7
1891 Female, age 85, both hemispheres 66.8
2436 Male, age 74, both hemispheres 58.0
Parahippocampal cortex
nTPM: 69.2
1990 Female, age 91, right hemisphere 77.9
1850 Male, age 80, both hemispheres 76.8
2245 Female, age 91, both hemispheres 75.8
2250 Female, age 67, right hemisphere 75.0
1933 Female, age 85, both hemispheres 70.9
2622 Female, age 67, right hemisphere 65.0
2692 Male, age 74, both hemispheres 64.8
2693 Female, age 94, both hemispheres 63.5
2532 Female, age 72, left hemisphere 63.4
2018 Male, age 76, both hemispheres 58.7
Perirhinal gyrus
nTPM: 70.8
1847 Female, age 91, left hemisphere 94.4
1841 Female, age 85, right hemisphere 74.4
1794 Male, age 80, right hemisphere 68.6
2848 Male, age 76, right hemisphere 59.4
2521 Female, age 94, right hemisphere 57.3
Subiculum
nTPM: 67.2
1901 Male, age 80, both hemispheres 85.6
1977 Female, age 85, both hemispheres 81.2
2619 Male, age 74, both hemispheres 67.7
2042 Male, age 76, both hemispheres 64.2
2729 Female, age 91, right hemisphere 54.0
2438 Female, age 94, left hemisphere 50.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 48.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.9
Samples: 255

Max nTPM: 145.9
Min nTPM: 10.4
Std nTPM: 25.9
Median nTPM: 43.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 145.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 131.9
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 128.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 127.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 125.8
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 117.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 112.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 110.8
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 107.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 105.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 104.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 59.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.9
FF:10169-103B7 60 years, female 89.3
FF:10153-102I9 76 years, female 30.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.6
Pig sample Sample description nTPM
Subiculum
nTPM: 21.8
Samples: 4

Max nTPM: 25.2
Min nTPM: 20.1
Sample A Female 25.2
Sample B Female 20.2
Sample C Male 21.8
Sample D Male 20.1
Dorsal hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 36.8
Min nTPM: 20.6
Sample A Female 36.8
Sample B Female 35.0
Sample C Male 20.6
Sample D Male 22.2
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 23.7
Min nTPM: 16.1
Sample A Female 22.5
Sample B Female 23.7
Sample C Male 19.6
Sample D Male 16.1
Ventral hippocampus
nTPM: 27.8
Samples: 4

Max nTPM: 31.1
Min nTPM: 18.5
Sample A Female 30.8
Sample B Female 18.5
Sample C Male 31.1
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 103.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 103.0
Samples: 4

Max nTPM: 113.6
Min nTPM: 93.4
Sample A Male 93.4
Sample B Male 103.2
Sample C Female 101.9
Sample D Female 113.6
Hippocampal formation
nTPM: 96.3
Samples: 4

Max nTPM: 110.3
Min nTPM: 91.2
Sample A Male 110.3
Sample B Male 92.1
Sample C Female 91.4
Sample D Female 91.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
74047788 Antisense, RP_051214_02_A04, Mouse strain C57BL/6J (56 days, male) 9.3
68269034 Antisense, RP_041208_01_E09, Mouse strain C57BL/6J (56 days, male) 5.2

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