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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:53.9 nTPM
HPA Brain:135.4 nTPM
GTEx:53.9 nTPM
Pig:80.1 nTPM
Mouse:165.8 nTPM
Allen mouse:10.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 115.9
2226 Male, age 75, left hemisphere 124.6
1961 Female, age 42, unknown 107.1
Dorsomedial nucleus
nTPM: 128.0
1989 Male, age 62, unknown 238.7
2017 Female, age 42, unknown 96.4
2041 Female, age 72, unknown 48.8
Lateral hypothalamic area
nTPM: 135.4
2271 Male, age 75, both hemispheres 173.8
1791 Male, age 80, right hemisphere 153.2
2228 Male, age 66, unknown 140.9
2412 Male, age 62, unknown 73.9
Mammillary body
nTPM: 77.4
1923 Female, age 72, unknown 136.8
2413 Male, age 66, unknown 106.1
1834 Female, age 42, unknown 66.3
1948 Female, age 72, unknown 43.7
1945 Male, age 80, right hemisphere 34.3
Paraventricular nucleus
nTPM: 82.2
2700 Male, age 62, unknown 82.2
Preoptic area
nTPM: 79.6
1907 Male, age 80, right hemisphere 132.5
2414 Female, age 72, unknown 65.3
1861 Female, age 42, unknown 41.0
Supraoptic nucleus
nTPM: 58.3
1894 Female, age 72, unknown 84.0
2835 Female, age 72, unknown 49.2
2043 Male, age 62, unknown 41.7
Ventromedial nucleus
nTPM: 118.8
1822 Female, age 42, unknown 119.5
1982 Female, age 72, unknown 118.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 53.9
Samples: 257

Max nTPM: 687.6
Min nTPM: 2.3
Std nTPM: 56.3
Median nTPM: 43.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 687.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 424.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 228.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 203.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 199.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 178.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 154.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 149.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 141.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 130.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 126.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 122.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 117.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 113.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 112.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 110.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 106.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 100.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 97.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 97.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 96.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 88.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 86.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 86.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 84.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 84.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 84.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 83.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 81.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 81.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 81.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 78.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 77.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 76.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 75.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 74.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 74.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 73.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 73.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 73.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 73.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 73.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 72.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 72.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 71.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 70.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 70.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 70.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 70.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 70.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 70.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 69.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 68.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 68.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 68.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 67.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 66.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 66.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 66.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 65.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 63.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 63.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 62.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 62.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 62.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 62.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 61.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 60.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 60.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 60.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 59.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 58.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 57.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 57.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 55.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 54.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 54.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 54.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 53.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 53.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 53.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 53.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 53.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 53.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 53.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 52.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 51.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 51.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 51.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 51.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 50.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 50.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 50.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 50.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 50.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 50.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 50.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 50.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 50.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 49.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 49.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 49.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 49.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 49.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 49.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 48.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 48.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 48.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 48.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 48.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 47.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 47.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 46.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 46.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 46.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 45.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 45.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 45.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 45.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 45.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 45.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 45.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 44.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 44.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 44.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 43.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 43.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 43.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 43.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 43.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 42.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 42.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 42.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 42.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 41.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 41.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 41.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 41.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 41.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 41.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 40.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 40.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 40.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 40.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 40.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 39.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 39.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 39.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 39.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 39.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 39.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 38.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 38.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 38.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 38.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 38.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 37.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 37.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 37.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 37.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 37.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 36.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 36.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 36.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 36.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 36.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 36.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 36.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 35.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 35.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 35.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 34.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 34.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 34.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 34.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 33.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 33.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 33.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 33.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 33.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 33.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 32.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 32.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 32.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 32.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 32.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 32.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 32.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 32.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 32.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 31.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 31.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 31.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 30.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 30.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 29.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 29.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 29.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 29.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 29.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 28.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 28.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 28.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 27.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 27.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 27.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 26.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 25.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 25.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 24.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 24.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 24.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 23.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 23.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 23.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 23.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 23.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 23.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 22.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 21.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 21.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 20.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 20.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 19.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 19.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 19.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 19.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 18.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 17.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 16.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 16.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 15.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 15.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 15.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 14.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 14.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 13.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 13.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 13.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 13.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 13.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 11.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 10.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 9.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 8.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 8.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 7.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 7.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 7.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 7.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 7.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 4.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 2.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 80.1
Samples: 4

Max nTPM: 134.4
Min nTPM: 57.8
Sample A Female 134.4
Sample B Female 57.8
Sample C Male 69.0
Sample D Male 59.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

165.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 165.8
Samples: 4

Max nTPM: 173.9
Min nTPM: 159.5
Sample A Male 165.8
Sample B Male 164.1
Sample C Female 159.5
Sample D Female 173.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.7
79360274 Antisense, RP_071018_01_G03, Mouse strain C57BL/6J (56 days, male) 10.7
79490122 Antisense, RP_071018_01_G03, Mouse strain C57BL/6J (56 days, male) 7.3

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