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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
343.2
nTPM
FANTOM5:
329.3
Scaled Tags Per Million
Pig:
135.4
nTPM
Allen mouse:
5.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
343.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 317.5
2301
Female, age 85, both hemispheres
383.8
2188
Female, age 91, both hemispheres
376.4
2090
Male, age 80, both hemispheres
339.5
1984
Male, age 76, both hemispheres
170.2
Dorsal cochlear nucleus nTPM: 282.9
2378
Male, age 80, both hemispheres
310.6
2187
Female, age 91, both hemispheres
302.0
2802
Male, age 74, right hemisphere
278.1
2370
Male, age 61, both hemispheres
270.5
2058
Male, age 76, both hemispheres
253.4
Dorsal tegmental nucleus nTPM: 298.6
2358
Male, age 61, both hemispheres
399.0
2083
Male, age 80, both hemispheres
310.5
2326
Male, age 74, both hemispheres
248.0
1936
Male, age 76, left hemisphere
237.0
Dorsolateral tegmental area nTPM: 266.5
2337
Male, age 61, both hemispheres
385.6
2654
Male, age 80, both hemispheres
312.3
2751
Female, age 85, both hemispheres
273.4
2141
Male, age 76, both hemispheres
191.1
2360
Male, age 74, both hemispheres
170.3
Kolliker-Fuse nucleus nTPM: 307.3
2793
Female, age 91, left hemisphere
400.7
2163
Male, age 80, both hemispheres
276.5
2315
Male, age 76, right hemisphere
244.8
Lateral lemniscal nuclei nTPM: 250.6
2320
Female, age 91, left hemisphere
327.9
2746
Female, age 85, left hemisphere
264.5
2169
Male, age 76, both hemispheres
241.6
2453
Male, age 74, right hemisphere
228.3
2036
Male, age 80, both hemispheres
190.6
Lateral parabrachial nucleus nTPM: 331.9
2792
Male, age 76, both hemispheres
399.6
2790
Male, age 61, both hemispheres
367.5
2013
Male, age 80, both hemispheres
329.2
2139
Female, age 85, right hemisphere
231.1
Lateral vestibular nucleus nTPM: 288.1
2311
Male, age 80, both hemispheres
310.5
2184
Male, age 76, both hemispheres
265.7
Locus coeruleus nTPM: 176.5
2720
Male, age 74, both hemispheres
249.0
2162
Male, age 80, both hemispheres
209.7
2317
Female, age 72, unknown
165.9
2123
Female, age 91, both hemispheres
161.9
2788
Male, age 74, unknown
156.0
2014
Male, age 55, unknown
146.5
1980
Male, age 76, both hemispheres
146.3
Medial parabrachial nucleus nTPM: 308.0
2156
Male, age 61, both hemispheres
368.7
2170
Female, age 91, both hemispheres
315.3
2854
Male, age 80, both hemispheres
296.9
2786
Male, age 76, both hemispheres
295.5
2463
Female, age 85, right hemisphere
263.5
Medial periolivary nuclei nTPM: 247.6
2081
Male, age 80, both hemispheres
321.5
2458
Female, age 91, both hemispheres
313.4
2063
Male, age 76, both hemispheres
221.0
2171
Female, age 85, both hemispheres
191.6
2791
Male, age 74, right hemisphere
190.4
Motor facial nucleus nTPM: 278.7
2697
Female, age 85, both hemispheres
382.1
2327
Male, age 80, both hemispheres
308.1
2795
Female, age 91, both hemispheres
293.7
2126
Male, age 61, both hemispheres
255.1
2365
Male, age 74, right hemisphere
232.0
2062
Male, age 76, both hemispheres
201.3
Motor trigeminal nucleus nTPM: 287.9
2321
Female, age 91, both hemispheres
334.3
2309
Male, age 76, both hemispheres
309.7
2335
Male, age 61, both hemispheres
280.7
2079
Male, age 80, both hemispheres
279.3
2560
Male, age 74, both hemispheres
235.6
Nuclei of the trapezoid body nTPM: 237.1
2166
Male, age 80, both hemispheres
332.0
2368
Female, age 91, both hemispheres
279.8
1983
Male, age 76, both hemispheres
215.9
2159
Male, age 61, both hemispheres
192.2
2735
Female, age 85, both hemispheres
165.4
Nucleus raphe magnus nTPM: 237.6
2328
Male, age 80, both hemispheres
332.3
2051
Male, age 76, both hemispheres
285.7
2459
Female, age 91, both hemispheres
280.7
2455
Male, age 74, both hemispheres
208.6
2172
Female, age 85, both hemispheres
169.8
2160
Male, age 61, both hemispheres
148.2
Paramedian reticular nucleus nTPM: 255.4
2052
Male, age 76, both hemispheres
314.1
2057
Male, age 80, both hemispheres
260.8
2313
Male, age 61, both hemispheres
226.8
2050
Female, age 85, both hemispheres
219.9
Pedunculopontine tegmental nucleus nTPM: 278.1
2338
Male, age 61, both hemispheres
350.7
2334
Male, age 80, both hemispheres
272.1
1921
Female, age 85, both hemispheres
211.5
Pontine nuclei nTPM: 255.1
2115
Male, age 80, left hemisphere
343.6
2319
Female, age 91, both hemispheres
338.7
1968
Male, age 76, left hemisphere
290.6
2109
Female, age 72, unknown
250.7
1863
Male, age 55, unknown
248.9
2454
Male, age 74, left hemisphere
246.1
2787
Female, age 85, both hemispheres
183.0
2727
Male, age 61, right hemisphere
139.2
Pontine raphe nucleus nTPM: 201.9
2122
Female, age 85, midline
206.2
2853
Male, age 76, midline
197.7
Posteroventral cochlear nucleus nTPM: 343.2
2135
Female, age 91, both hemispheres
435.5
2341
Male, age 80, both hemispheres
408.2
2371
Male, age 61, both hemispheres
336.6
2070
Male, age 76, both hemispheres
307.5
2752
Female, age 85, both hemispheres
228.2
Principal sensory trigeminal nucleus nTPM: 253.1
2367
Female, age 91, left hemisphere
342.0
2324
Male, age 76, both hemispheres
277.4
2008
Male, age 80, left hemisphere
202.7
2158
Male, age 61, both hemispheres
190.5
Reticular pontine nucleus, caudal nTPM: 278.3
2092
Male, age 76, both hemispheres
288.5
2457
Female, age 91, both hemispheres
283.6
2559
Male, age 74, both hemispheres
276.4
2332
Male, age 80, right hemisphere
264.8
Reticular pontine nucleus, oral nTPM: 285.4
2366
Female, age 91, both hemispheres
422.4
1939
Male, age 80, both hemispheres
294.9
2167
Male, age 76, both hemispheres
286.6
2012
Female, age 85, both hemispheres
227.0
2361
Male, age 74, both hemispheres
196.0
Reticulotegmental nucleus nTPM: 271.6
2322
Female, age 91, both hemispheres
312.5
2333
Male, age 80, both hemispheres
285.3
2452
Male, age 74, both hemispheres
275.4
2325
Male, age 76, both hemispheres
213.4
Spinal trigeminal nucleus, oral nTPM: 240.7
2164
Male, age 80, both hemispheres
300.1
1978
Male, age 76, both hemispheres
238.9
2737
Female, age 85, both hemispheres
183.1
Subcoeruleus area nTPM: 264.5
2369
Female, age 85, left hemisphere
319.2
2451
Male, age 74, both hemispheres
278.4
2089
Male, age 76, left hemisphere
262.0
1958
Male, age 80, both hemispheres
245.4
2323
Female, age 91, left hemisphere
217.6
Superior olive nTPM: 280.6
2561
Female, age 91, both hemispheres
338.9
2329
Male, age 80, right hemisphere
336.5
2020
Male, age 76, both hemispheres
324.4
1875
Female, age 85, both hemispheres
214.2
2364
Male, age 74, right hemisphere
189.1
Ventral periolivary nuclei nTPM: 274.7
2023
Male, age 76, both hemispheres
345.1
2794
Female, age 91, left hemisphere
278.5
2165
Male, age 80, both hemispheres
276.5
2130
Female, age 85, both hemispheres
198.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 287.1
2359
Male, age 61, both hemispheres
345.9
2161
Male, age 80, both hemispheres
309.0
2456
Female, age 91, both hemispheres
293.7
1959
Male, age 76, both hemispheres
283.7
2840
Female, age 85, both hemispheres
278.9
2449
Male, age 74, both hemispheres
211.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
135.4
Pig sample
Sample description
nTPM
Pons nTPM: 135.4
Samples: 4
Max nTPM: 172.8
Min nTPM: 112.0
Sample A
Female
112.0
Sample B
Female
121.0
Sample C
Male
135.8
Sample D
Male
172.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.