A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3936.0
nTPM
Monaco:
676.2
nTPM
Schmiedel:
274.3
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
3936.0
HPA sample
nTPM
Classical monocyte nTPM: 3936.0
Samples: 6
Max nTPM: 7784.0
Min nTPM: 2469.6
P10809_1003
7784.0
P10809_1020
3175.8
P10809_1039
2659.7
P10809_1058
3533.8
P10809_1080
2469.6
P10809_1107
3992.9
Intermediate monocyte nTPM: 2997.4
Samples: 6
Max nTPM: 4285.1
Min nTPM: 2146.5
P10809_1004
2579.2
P10809_1023
3624.0
P10809_1042
2921.3
P10809_1061
2146.5
P10809_1081
2428.2
P10809_1108
4285.1
Non-classical monocyte nTPM: 2525.6
Samples: 5
Max nTPM: 3587.1
Min nTPM: 2110.9
P10809_1005
2526.5
P10809_1053
2239.0
P10809_1072
2164.6
P10809_1082
2110.9
P10809_1109
3587.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
676.2
Monaco sample
nTPM
Classical monocyte nTPM: 479.2
Samples: 4
Max nTPM: 669.7
Min nTPM: 344.7
RHH5313_R3680
669.7
RHH5221_R3593
385.1
RHH5250_R3622
344.7
RHH5279_R3651
517.1
Intermediate monocyte nTPM: 676.2
Samples: 4
Max nTPM: 871.2
Min nTPM: 399.9
RHH5314_R3681
706.4
RHH5222_R3594
871.2
RHH5251_R3623
727.3
RHH5280_R3652
399.9
Non-classical monocyte nTPM: 478.3
Samples: 4
Max nTPM: 614.2
Min nTPM: 271.9
RHH5315_R3682
614.2
RHH5223_R3595
541.2
RHH5252_R3624
485.7
RHH5281_R3653
271.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
274.3
Schmiedel sample id
TPM
Classical monocyte TPM: 274.3
Samples: 91
Max TPM: 344.9
Min TPM: 215.1
MONOCYTES_1
344.9
MONOCYTES_2
333.7
MONOCYTES_3
332.8
MONOCYTES_4
324.2
MONOCYTES_5
323.8
MONOCYTES_6
312.9
MONOCYTES_7
311.9
MONOCYTES_8
308.4
MONOCYTES_9
307.8
MONOCYTES_10
305.6
MONOCYTES_11
305.0
MONOCYTES_12
304.7
MONOCYTES_13
302.8
MONOCYTES_14
302.3
MONOCYTES_15
301.7
MONOCYTES_16
296.5
MONOCYTES_17
295.4
MONOCYTES_18
295.1
MONOCYTES_19
294.9
MONOCYTES_20
293.9
MONOCYTES_21
292.7
MONOCYTES_22
289.2
MONOCYTES_23
288.8
MONOCYTES_24
288.2
MONOCYTES_25
288.0
MONOCYTES_26
287.8
MONOCYTES_27
286.5
MONOCYTES_28
286.3
MONOCYTES_29
286.3
MONOCYTES_30
286.1
MONOCYTES_31
285.9
MONOCYTES_32
285.0
MONOCYTES_33
284.9
MONOCYTES_34
284.7
MONOCYTES_35
282.6
MONOCYTES_36
280.8
MONOCYTES_37
280.4
MONOCYTES_38
280.3
MONOCYTES_39
279.5
MONOCYTES_40
279.0
MONOCYTES_41
278.5
MONOCYTES_42
277.4
MONOCYTES_43
276.5
MONOCYTES_44
276.3
MONOCYTES_45
273.1
MONOCYTES_46
272.7
MONOCYTES_47
272.7
MONOCYTES_48
271.3
MONOCYTES_49
270.6
MONOCYTES_50
269.8
MONOCYTES_51
269.1
MONOCYTES_52
268.8
MONOCYTES_53
267.8
MONOCYTES_54
267.7
MONOCYTES_55
266.3
MONOCYTES_56
266.1
MONOCYTES_57
264.9
MONOCYTES_58
264.1
MONOCYTES_59
262.8
MONOCYTES_60
260.8
MONOCYTES_61
260.8
MONOCYTES_62
260.4
MONOCYTES_63
260.0
MONOCYTES_64
259.9
MONOCYTES_65
259.1
MONOCYTES_66
258.0
MONOCYTES_67
257.2
MONOCYTES_68
257.0
MONOCYTES_69
256.3
MONOCYTES_70
256.2
MONOCYTES_71
255.3
MONOCYTES_72
254.9
MONOCYTES_73
254.0
MONOCYTES_74
253.8
MONOCYTES_75
250.6
MONOCYTES_76
247.4
MONOCYTES_77
247.0
MONOCYTES_78
246.0
MONOCYTES_79
244.7
MONOCYTES_80
244.4
MONOCYTES_81
243.7
MONOCYTES_82
243.1
MONOCYTES_83
242.4
MONOCYTES_84
241.4
MONOCYTES_85
241.4
MONOCYTES_86
238.0
MONOCYTES_87
235.3
MONOCYTES_88
231.8
MONOCYTES_89
228.0
MONOCYTES_90
216.4
MONOCYTES_91
215.1
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Non-classical monocyte TPM: 189.5
Samples: 90
Max TPM: 234.9
Min TPM: 149.2
M2_1
234.9
M2_2
231.0
M2_3
229.9
M2_4
229.0
M2_5
223.0
M2_6
222.4
M2_7
222.1
M2_8
221.7
M2_9
213.1
M2_10
212.4
M2_11
209.4
M2_12
209.4
M2_13
208.1
M2_14
205.7
M2_15
205.6
M2_16
204.8
M2_17
204.1
M2_18
203.9
M2_19
202.7
M2_20
201.5
M2_21
201.4
M2_22
201.3
M2_23
199.5
M2_24
198.8
M2_25
198.4
M2_26
197.5
M2_27
197.3
M2_28
197.2
M2_29
196.8
M2_30
196.5
M2_31
195.2
M2_32
194.8
M2_33
193.8
M2_34
193.0
M2_35
192.0
M2_36
191.9
M2_37
191.5
M2_38
191.5
M2_39
190.7
M2_40
189.7
M2_41
189.2
M2_42
188.9
M2_43
188.8
M2_44
188.3
M2_45
188.2
M2_46
187.9
M2_47
187.8
M2_48
187.7
M2_49
187.5
M2_50
186.6
M2_51
186.0
M2_52
185.9
M2_53
185.8
M2_54
185.4
M2_55
185.3
M2_56
185.1
M2_57
184.7
M2_58
184.7
M2_59
184.7
M2_60
183.9
M2_61
182.5
M2_62
181.6
M2_63
179.3
M2_64
179.2
M2_65
178.9
M2_66
178.4
M2_67
178.1
M2_68
177.0
M2_69
176.9
M2_70
176.4
M2_71
176.2
M2_72
174.1
M2_73
173.7
M2_74
173.5
M2_75
172.0
M2_76
171.7
M2_77
170.7
M2_78
170.0
M2_79
169.9
M2_80
169.4
M2_81
169.2
M2_82
168.8
M2_83
165.9
M2_84
164.9
M2_85
164.4
M2_86
159.8
M2_87
158.7
M2_88
157.2
M2_89
155.9
M2_90
149.2
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