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  • TISSUE

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  • CRMP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:61.4 nTPM
HPA Brain:108.2 nTPM
GTEx:61.4 nTPM
Pig:83.7 nTPM
Mouse:88.0 nTPM
Allen mouse:1.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 108.2
2226 Male, age 75, left hemisphere 123.3
1961 Female, age 42, unknown 93.2
Dorsomedial nucleus
nTPM: 73.6
1989 Male, age 62, unknown 84.1
2041 Female, age 72, unknown 78.6
2017 Female, age 42, unknown 58.0
Lateral hypothalamic area
nTPM: 91.7
2228 Male, age 66, unknown 105.0
2271 Male, age 75, both hemispheres 101.2
1791 Male, age 80, right hemisphere 95.7
2412 Male, age 62, unknown 65.0
Mammillary body
nTPM: 42.7
1923 Female, age 72, unknown 55.8
2413 Male, age 66, unknown 51.2
1948 Female, age 72, unknown 38.7
1945 Male, age 80, right hemisphere 36.8
1834 Female, age 42, unknown 30.9
Paraventricular nucleus
nTPM: 57.9
2700 Male, age 62, unknown 57.9
Preoptic area
nTPM: 66.9
1907 Male, age 80, right hemisphere 98.2
1861 Female, age 42, unknown 52.4
2414 Female, age 72, unknown 50.1
Supraoptic nucleus
nTPM: 56.2
1894 Female, age 72, unknown 63.4
2835 Female, age 72, unknown 55.4
2043 Male, age 62, unknown 49.8
Ventromedial nucleus
nTPM: 84.8
1982 Female, age 72, unknown 88.0
1822 Female, age 42, unknown 81.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 61.4
Samples: 257

Max nTPM: 121.9
Min nTPM: 7.6
Std nTPM: 24.5
Median nTPM: 63.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 121.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 115.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 111.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 110.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 106.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 106.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 105.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 105.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 103.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 102.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 101.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 101.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 98.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 98.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 97.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 97.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 96.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 94.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 94.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 93.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 93.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 93.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 93.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 92.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 92.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 92.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 92.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 91.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 90.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 90.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 90.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 88.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 88.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 88.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 87.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 87.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 87.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 87.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 87.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 87.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 87.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 86.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 86.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 86.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 86.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 85.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 85.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 85.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 85.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 84.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 84.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 84.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 84.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 84.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 84.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 84.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 83.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 83.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 83.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 83.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 82.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 81.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 81.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 81.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 81.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 80.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 80.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 80.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 78.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 78.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 78.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 78.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 77.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 77.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 77.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 77.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 77.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 77.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 76.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 76.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 76.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 76.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 76.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 75.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 74.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 74.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 74.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 74.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 74.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 73.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 73.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 73.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 73.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 73.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 72.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 72.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 71.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 71.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 71.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 70.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 70.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 70.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 70.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 69.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 69.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 69.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 68.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 68.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 68.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 68.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 67.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 67.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 67.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 67.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 67.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 67.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 67.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 66.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 66.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 66.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 65.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 65.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 65.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 65.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 65.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 64.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 63.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 63.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 63.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 63.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 62.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 62.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 62.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 61.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 61.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 60.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 60.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 60.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 59.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 59.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 58.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 58.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 58.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 57.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 57.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 57.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 56.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 56.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 55.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 55.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 55.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 53.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 53.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 53.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 53.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 53.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 53.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 53.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 53.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 52.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 52.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 52.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 51.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 51.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 51.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 51.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 50.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 50.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 49.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 49.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 48.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 48.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 48.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 47.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 47.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 47.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 47.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 47.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 47.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 46.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 46.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 46.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 45.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 45.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 45.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 45.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 44.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 43.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 42.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 42.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 42.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 42.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 42.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 41.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 41.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 40.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 40.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 40.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 40.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 39.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 39.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 39.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 39.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 38.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 38.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 38.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 37.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 36.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 34.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 34.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 34.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 33.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 33.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 32.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 32.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 32.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 32.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 31.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 31.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 31.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 30.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 29.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 29.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 29.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 28.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 28.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 27.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 27.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 27.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 27.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 26.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 26.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 26.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 25.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 25.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 24.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 24.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 23.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 23.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 22.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 22.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 21.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 20.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 20.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 19.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 19.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 19.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 14.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 14.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 14.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 12.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 12.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 9.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 7.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 83.7
Samples: 4

Max nTPM: 99.0
Min nTPM: 74.3
Sample A Female 99.0
Sample B Female 74.3
Sample C Male 75.4
Sample D Male 86.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 88.1
Samples: 4

Max nTPM: 93.0
Min nTPM: 80.5
Sample A Male 93.0
Sample B Male 91.7
Sample C Female 87.0
Sample D Female 80.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.5
73512561 Antisense, RP_050921_01_B04, Mouse strain C57BL/6J (56 days, male) 1.5

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